Manihot esculenta (cassava): 110613602
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Entry
110613602 CDS
T05761
Name
(RefSeq) probable U3 small nucleolar RNA-associated protein 7
KO
K14768
U3 small nucleolar RNA-associated protein 7
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mesc03009
]
110613602
Ribosome biogenesis [BR:
mesc03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
110613602
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BING4CT
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40
ANAPC4_WD40
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_TEP1_2nd
EIF3I
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
Beta-prop_EIPR1
Cytochrom_D1
SxtJ
WDR90_beta-prop_4th
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
110613602
NCBI-ProteinID:
XP_021610514
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Position
4:21670637..21681155
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AA seq
536 aa
AA seq
DB search
MGVKQDNGDPEKILPPIEQDLSNEIDAKLRKYLRGEGANLEVLKDKKLKGQLSVREELYG
ISAKAAAKAEEWLMPSEGGYLEVEGIEKPWRINQLSITSEINLSSLKNQHDIIIPDLGPY
TLDFNSSGRYMAVAGRRGHLAVVDMKNMSLIKEIQVRETVHDIVFLHNELFFAAAQKKYP
YIYNRDGIELHCLKEHGSVLRLQFLKNHFLLASINKFGQLHYQDVTMGEMIGNIRTGLGR
TDVMQVNPFNGVVGLGHSGGTVSMWKPTSAVPLVKMLCHPGPVSAMAFHPNGHIMATSGK
ERKIKIWDLRKFEVLQTIPGHAKALDFSQKGLLAAGNGSFVQIFGDLSESQNYSRYMGHS
MVKGYQIGKVLFRPYEDVLALGHSMGWSSILIPGSGEPNFDTWVANPYETSKQRREKEVR
SLLDKLPPETIMLNPSKIGTMRPVKKKEKQSKQEIEAEMEAAVEAVKDIAFKNKTKGRNK
ASKKAKKKKEVIERVKRPFLDKEMKDDEKLAKKQKISEENALPMALQRFASKKPTA
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtcaaacaagacaatggtgatcctgaaaagattttgcctcccattgagcaggat
ttatcgaatgaaattgatgctaagttaaggaagtaccttagaggagaaggtgctaatttg
gaggttttaaaagacaaaaaactaaaaggtcagctttctgttagagaagaattatatgga
atatctgctaaagctgctgccaaggcagaggagtggcttatgccaagtgagggaggctat
cttgaggttgaaggtattgagaagccatggaggatcaatcagctctcaattacttctgaa
attaatctctcaagcttaaagaatcaacatgatataattataccagatcttggtccatac
actttggatttcaactcaagtgggcggtacatggctgttgctgggcgcaggggacacctg
gcagttgtagacatgaaaaacatgagcctaattaaggagattcaggtcagggaaacagtg
catgatattgtgtttctgcacaatgagcttttttttgctgctgcccagaaaaagtacccg
tacatatataacagggatggcattgaacttcactgtttaaaggaacatggttcagtgttg
aggcttcagtttctgaaaaaccattttctcctggcatcaataaacaaattcgggcagctc
cactatcaagatgtgacaatgggtgagatgatcggtaatatacggacgggtttaggtcgt
actgatgtgatgcaggttaatcccttcaatggggttgttggtttgggccattcaggaggt
acagtgagcatgtggaaacccaccagtgcagttccgcttgtcaaaatgttatgtcatcct
ggtcctgtctcggcaatggcattccaccctaatggccacatcatggctacgtctggcaag
gaaaggaaaatcaagatttgggacttgaggaaatttgaggttctccaaaccataccaggc
catgcaaaggccttggatttcagtcaaaagggattactggctgctggaaatggatcattc
gttcagatttttggagatctctcagaatcacagaattatagcaggtatatgggccattca
atggtgaagggttaccagattggcaaagtgttgtttagaccatatgaagatgttctagcc
ctagggcactccatgggatggtcttcaattcttatcccagggtctggggaacccaacttc
gacacttgggttgcaaacccgtatgaaacatctaagcagcggagagagaaggaagttcga
tctcttctcgacaagctcccacctgagacaatcatgttgaacccttcaaagattggtaca
atgaggccagtaaagaagaaagagaagcaaagcaagcaagaaatagaagctgagatggaa
gctgctgttgaagcggtaaaggacattgcttttaagaacaaaacaaaggggaggaataag
gcgagtaagaaagcaaagaagaaaaaggaagttattgagagagtgaagagacctttcttg
gataaagaaatgaaagatgatgaaaagctggctaagaagcagaaaattagcgaggaaaat
gcattgccaatggccttgcagagatttgccagtaaaaaaccaacagcttga
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