Manihot esculenta (cassava): 110613720
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Entry
110613720 CDS
T05761
Name
(RefSeq) protein argonaute 5
KO
K11593
eukaryotic translation initiation factor 2C
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mesc03019
]
110613720
03036 Chromosome and associated proteins [BR:
mesc03036
]
110613720
Messenger RNA biogenesis [BR:
mesc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
110613720
Chromosome and associated proteins [BR:
mesc03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
110613720
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
110613720
microRNA pathway
RISC loading complex
110613720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
DUF2344
DUF3678
Motif
Other DBs
NCBI-GeneID:
110613720
NCBI-ProteinID:
XP_021610669
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All DBs
Position
4:1545992..1552143
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AA seq
991 aa
AA seq
DB search
MSRRGGGRRPDSRSDQQSSSPSPSFQRGGGGGRGGRGGRGGRGREGPGHSPLPTFTQSAS
TPATSFSPISRPPVPAYSPEAQTPSVAPSPPQAVASSSRAPPSKAAASSSTAEEIRREVE
QKLSLGDQATKAVRFPSRPGFGTVGMKCVVKANHFLVQVADRDLCQYDVTITPEVTSKKV
NRDIISELVRMYRASHLGNRMPAYDGRKNLYTAGPLPFESKEFIVKLVEKNNAAGSSGSS
KRERQFKVAIKFASKADLHHLQQFLYGRQADAPQETVQVLDIVLRASPSEKYTTVGRSFF
SPDLGPRGELGDGIEYWRGYYQSLRPTQMGLSFNVDVSARSFFEPIMVTDFVAKYFRLRD
LSRPLSEQDRIKVKKSLKGVKVELHHREYPKSYKITSLSNQPMNQTFFTLDDKNSKVSVV
QYFRERYNIMLKYTSLPALQAGSDSKPVYLPMELCRIVEGQRYTKKLNERQVTQLLRATC
QRPHDRENSIKQMVRRNNYSRDELVANEFGIQVKEELALVDARVLPPPMLKYHETGGESR
VDPRLGQWNMINKKMVNGGRVDFWTCVNFSSQIHPNLPRDFCQQLVQMCVSKGMGFNPNP
ILPIQSAHPSQIERALADVHKQCTAKLANEKKQLQLLIIILPDFTGSYGKIKRICETEFG
IVSQCCQPKQAAKLSKQYFENVALKINVKVGGRNTVLNDAIQRRIPLVTDLPTIIFGADV
THPAPGEDSNPSIAAVVASMDWPEVTKYRGLVSAQAHREEIIQDLYKSYHNPDKGLVHLG
MIRELLISFRKSTGHKPGRIIFYRDGVSEGQFSQVLLHEMDAIRKACSSLEEGYLPRVTF
VVVQKRHHTRLFPVDRGQTDRSGNILPGTVIDTKICHPKEFDFYLNSHAGIQGTSRPTHY
HVLYDENGFTADGLQILTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARYYIEGETSDSG
SSSGRNTIGRSKEVQPLPVIKDNVKDVMFYC
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgacgtggcggtggccgccggccggattctcgctcggaccagcaatcatcatcc
ccatcgccgtcatttcagcgcggtggtggaggcggtaggggtggtagaggtggaagaggt
ggccgaggacgtgaaggacctggccatagtccgcttccaactttcactcaatctgcttcc
acgccggctacgtccttctctccaatatctcgtccgccggtgcctgcttactctcctgaa
gctcaaaccccgtcggttgctccgtcgcctcctcaagctgtggcttcttcgtcgcgagca
ccgccgtctaaggcggcagcttcgagttcgacggcggaggagattcgacgagaggtcgaa
caaaagctgtcgcttggagatcaggcgaccaaggctgttcgtttcccgtctaggcctggg
tttgggactgtcggcatgaagtgcgtggttaaggcgaaccattttttggtccaagtcgct
gacagggatctctgccaatatgatgtcaccataactcctgaagtaacttcaaagaaggta
aacagggatataatatctgagcttgttcgaatgtatcgtgcatcacatttgggcaaccga
atgcctgcttatgatggcaggaaaaacctctatacagcagggcctttgccttttgaatct
aaagaatttattgtcaagctggttgagaagaataatgcagctgggtcttctggttcatcc
aagagggaaagacaatttaaagtggcaatcaaatttgcgtctaaggcggaccttcatcat
ttgcaacaatttttgtatggcagacaagcagatgctccgcaagaaaccgtacaagttctt
gatattgtactcagggcatcaccatcagaaaagtatacaactgttgggaggtcatttttc
tcacctgatctggggccaaggggtgagcttggtgatggtatagaatattggagaggatat
tatcaaagccttcgcccaacccagatgggactgtcttttaatgttgatgtgtcagccaga
tccttctttgagccaattatggtgactgactttgtagctaagtactttaggttgagagat
ttgtcaaggcctctgtctgaacaagatcgcataaaggtgaagaagtctttaaaaggagta
aaagtagagctacatcacagggagtatcctaaaagctacaagatcactagcttatctaat
cagccaatgaatcaaactttcttcactctcgatgataagaattcaaaagtatcagttgtt
caatactttcgtgagagatacaacattatgctcaaatatacgtccttgcctgcccttcaa
gccggcagtgattcaaagcccgtttatttgcctatggagctttgtaggattgttgaagga
cagaggtacacaaagaaattgaacgaaaggcaagttactcagctgttaagggcaacttgt
caacgccctcatgatcgggaaaatagcattaagcagatggttaggcggaataattacagt
agagatgagcttgtggcaaatgaatttggaattcaagttaaagaagaacttgcactcgtt
gatgctcgagttttgccgcctccaatgcttaagtatcatgaaactgggggtgaatcaagg
gttgatccacgcttaggccaatggaatatgataaacaagaaaatggtgaatggagggaga
gtggatttttggacatgtgtgaacttctcttcgcaaatccatccaaatttgcctcgtgac
ttttgtcagcagttagttcagatgtgtgtcagcaaaggaatgggattcaatccaaaccct
attctgccaatacaatcagctcatcctagccagattgagagggctctggctgatgttcac
aagcagtgtactgcaaaacttgcaaatgagaagaaacagcttcagttgttgataatcatt
ttaccagatttcactgggtcttatgggaagatcaaacgaatctgtgaaacagaatttgga
attgtctctcagtgctgtcaaccaaagcaggcagcaaagctaagtaaacagtattttgaa
aatgttgccctcaaaatcaatgttaaggttggcggtagaaatactgtgttgaatgatgct
attcaaaggagaattccccttgtgactgatcttcctacaattatttttggtgctgatgta
actcatccagctcctggggaggactctaatccatcgatagctgcagtagtagcttcaatg
gactggccagaggtaacaaagtatagaggccttgtctctgcacaagctcatcgagaagaa
attatccaggatctctataaatcatatcataatccagataagggattagttcatttagga
atgataagggaattactaatatccttcagaaaatcaactgggcataaacctggcaggatt
atattctacagagatggtgttagtgagggccaatttagccaggtcttgctacatgagatg
gatgccatacgaaaggcttgttcttcacttgaggagggataccttccacgtgttaccttt
gttgtagttcagaagagacatcatacacgactttttcctgttgatcgtggtcagacagac
aggagtggcaatattctgccaggcactgttattgatactaagatatgccacccgaaggag
ttcgatttctacctcaacagccatgctggaattcagggaacaagcagacctacacactac
catgtgttgtatgatgagaatgggttcactgccgatgggttgcaaattctgactaacaat
ctttgttatacgtatgcgaggtgtacccgttctgtctcaatagtccctcctgcctattat
gcgcatttagctgcttttcgggctcgatattacatagagggcgaaacatcagatagtgga
tcttcaagtggtaggaatacaatagggaggagtaaggaggtccagcctcttcctgtgatc
aaagataatgtgaaagatgttatgttttattgctga
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