Manihot esculenta (cassava): 110613817
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Entry
110613817 CDS
T05761
Name
(RefSeq) nuclear pore complex protein NUP96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110613817
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mesc03019
]
110613817
03036 Chromosome and associated proteins [BR:
mesc03036
]
110613817
Messenger RNA biogenesis [BR:
mesc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110613817
Chromosome and associated proteins [BR:
mesc03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
110613817
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Motif
Other DBs
NCBI-GeneID:
110613817
NCBI-ProteinID:
XP_021610845
LinkDB
All DBs
Position
4:complement(30975763..30981915)
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AA seq
1068 aa
AA seq
DB search
MESPSLLPVPEDSNKLWNTICNAHFGISCGFDCEVGSSSLQTQCKKRRISPDNDKSCGIL
RQIVSSLPILRSTDYYMEPSLTYLAARELMDPGYICRVPDFTVGRLGYGRVKFLGMTDIR
WLDLDEIVKFHRHEIVVYEDETAKPPVGQGLNKPSEVTLTLHIKLSEFHDGQLKNFEEKL
RGSTERQGAYFISFDPAIREWKFSVCHFSRFGLSDDDEEDIIMDDIVAVEEPAEMNGGET
LETNEKTQVELEPTGTMLYHSLPAHLGLDPVKMKEMRMLMFPVEEDVEVGSFNGHSLQKP
SSSKEHARHPLQNSAQKMSHRSSIPVARKTPLALLEYNPGSFDSSSPGTILMTQQNKGLP
LKAMRGEGFRLDLNHETPITGSHSRNIVDAGLFMGRSFRVGWGPNGVLVHPGALVGSNGS
QRFLSSVINVEKVAIDRVIKDEDNNTKKDLIEFAFDSPLNLHKTINHETKEVEVGFFKLK
LQKVLSNRLTLSEICRSYIDIIEKQLEVPGLSSSARLISMHQVMIWELIKVLFSERENSG
QSKSVGADNEEDMMQDMKEGSLEIDQESLPLIRRAEFSCWLQESVCHRVQEEVSSLNDSS
YLEHIFSLLTGRQLDGAVEMAVSKGDVRLACLLSQAGGSTVNRTDVARQLDLWRINGLDF
KFIEKERIRLYELLSGNVHDALNDVKIDWKRFLGLLMWYRLAPHTSLPIIFQTYQHLLDD
DKAPYPLPIYIDEGPAEEAVNFTGRHFDLSYYLMLLHANGEGEFGFLRTMFSAFSSTNDP
LDYHMIWHQRAVLEAVGVFSSNDLQVLDMGFVSQLLCIGQCHWAIYVVLHMPYRDDYPYL
QATLIREILFQYCETWSSDESQRQFIENLDIPLAWLHEAMAVYFSYRGDLLKALEHYLEC
ANWQKAHYIFITSVSHKLFLSGNHSEIWRLATSMEDHKSQIENWDLGAGIYISFYLIRSS
FQENDNTMSELDSLESKNSTCRDFLGHLNESLAVFGDRLPIDARVAYSKMAEEISELLLS
DISEGSTRDAQLSCFHTVFDAPVQEDLRSNHLQDAVSLFTLYLSEMAA
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atggagtctccttctctcctcccggttcccgaggattccaataaactatggaatacaata
tgcaatgcccattttggtatttcctgtggatttgattgtgaagttgggtcttctagttta
cagacccaatgtaagaaaagaagaatatctccagacaatgataaatcatgtggaatttta
aggcagattgtatcttcactacccatattgcgctcaactgattactatatggaaccttcc
ttgacttatttggctgcccgagaacttatggatcctggttatatctgccgagttccagat
ttcactgttgggagattaggttatggacgtgtcaagtttcttggcatgactgatattagg
tggttggacttggatgagattgtgaagtttcataggcatgaaatagtagtttatgaagat
gaaactgctaaacctccagttggccagggccttaacaagccttctgaagtgacattgact
ctacatataaaattgtcagagttccatgacgggcagcttaaaaattttgaggagaaattg
agggggagtacagagagacagggggcttatttcatttcgtttgacccagcaattagggaa
tggaagttttcagtttgccatttcagcagatttggattgagtgatgatgatgaggaagat
atcataatggatgatatcgtagcagttgaagaaccagctgagatgaatggtggtgagact
ctagagacaaatgaaaagacccaagtagaattagaacccactggaactatgctttatcat
tctcttccagcacatcttggccttgatccggtaaagatgaaagagatgaggatgctgatg
tttccagtagaggaagatgtggaagttgggagtttcaatggccattcacttcagaaacca
tcatctagtaaagaacatgcaagacatcctttacagaattctgctcagaaaatgagtcat
agatctagcattcctgttgcaaggaaaacaccattggctctgcttgagtacaatcctggt
agttttgattctagttcccctggaaccattttgatgacccaacaaaataagggcctgcct
ttaaaggcaatgaggggagaaggatttaggctggacttgaatcatgagacaccaataact
ggaagccactctcgcaacatagttgatgctggtttgttcatgggcagatcatttcgtgta
ggttggggcccaaatggcgtccttgttcaccctggtgctcttgttggatctaatggttct
cagaggtttttatcttctgtaattaatgtagagaaggttgcaattgacagagtaatcaaa
gatgaagataataataccaaaaaggatctaattgagtttgcttttgactcccctttgaat
cttcacaaaacaataaatcatgaaacaaaagaagttgaagtcggtttctttaaacttaag
ctccaaaaagttctttctaatcgcttaacactgtcagagatttgtcggagttacatagac
attattgaaaagcagctggaggttccagggctttcatcatctgctcgtttgatttcgatg
catcaagtgatgatttgggaattgataaaagttcttttttctgaaagggaaaatagtgga
cagtcgaaatcagtgggtgctgataatgaggaagacatgatgcaggatatgaaggaaggt
tctttggaaattgaccaggaatcacttcctcttatccgaagagcagagttcagttgttgg
ttacaagaaagtgtctgtcaccgtgtccaggaggaagtgagctctctgaatgattcgagt
tacctcgaacacattttctcactcttgactgggcgacaactggatggagctgtggaaatg
gctgtttctaaaggagatgttagactagcttgtttgttgagtcaagctggagggtctaca
gtaaaccgtactgatgttgcacgacagcttgatctttggaggatcaatgggctagatttc
aaattcattgaaaaggaaagaataaggctgtatgagttgctttccggtaatgttcatgat
gcattgaatgatgttaaaattgactggaaaaggtttttagggctattgatgtggtatcgg
ctagcacctcacacgtctttgcccattatttttcagacataccagcaccttcttgatgat
gataaggctccatatcctcttcctatatacattgatgaaggaccagcagaagaggctgta
aatttcacagggagacactttgatctctcatattatcttatgcttcttcatgccaatgga
gagggtgaatttggttttctgaggaccatgtttagtgccttctcttcaacaaatgaccca
ctcgactaccatatgatttggcatcagcgagcagttttggaagctgttggtgttttttcc
tctaatgatcttcaagttcttgatatgggatttgtttcacagctgttgtgtattgggcaa
tgtcattgggccatctatgtggtccttcacatgccataccgtgatgattatccatatctc
caagctacccttattcgggaaattttgtttcagtattgcgaaacttggagttcagatgaa
tcacaacgccaatttattgagaaccttgacattcctctggcatggttgcatgaagctatg
gcagtttacttcagttaccgtggggatctcttgaaggcccttgaacactatcttgaatgt
gcaaattggcaaaaggcccattatattttcataacttcagtttcccataaattgttttta
tcgggcaaccactcagagatatggaggcttgcgacttcaatggaggaccacaagtcgcaa
attgaaaactgggacttgggagctggaatttatatatctttttatctgatacggagttca
tttcaagaaaatgataatactatgagtgaactggattctcttgagagcaaaaattctacc
tgtagagacttccttggtcatctgaatgagtctttggctgtttttggtgatcgattgcct
attgatgcgagggtagcatactcaaagatggcagaggagattagtgaattgcttctatct
gacataagcgagggatccacacgtgacgctcagttaagttgcttccacactgtgttcgat
gcaccagttcaagaagacctccgctcaaatcatctgcaggatgctgtgtctctctttacg
ttatatctttcagagatggctgcctag
DBGET
integrated database retrieval system
