Manihot esculenta (cassava): 110613854
Help
Entry
110613854 CDS
T05761
Name
(RefSeq) probable inactive chitinase-like protein LaCIC
KO
K20547
basic endochitinase B [EC:
3.2.1.14
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc00520
Amino sugar and nucleotide sugar metabolism
mesc01100
Metabolic pathways
mesc04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
110613854
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
110613854
Enzymes [BR:
mesc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.14 chitinase
110613854
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_19
Chitin_bind_1
Motif
Other DBs
NCBI-GeneID:
110613854
NCBI-ProteinID:
XP_021610904
LinkDB
All DBs
Position
4:26194917..26196373
Genome browser
AA seq
343 aa
AA seq
DB search
MGAFAFIISSFLLTSFLLSISAEQCGYQAGGALCPEGQCCSQWGWCGTTVEYCCDGCQSQ
CNPDDICGSGGGGGGGGGGGGGGGGGGGGGEGGGDLSRIISKSLFEGMLIHRNDAACPAR
GFYTYEAFITAAQAFPTFGTTGDDATRKREIAAFFGQTSHETTGGWPTAPGGPYAWGYCF
LEELSPSDYCSSSAKYPCAPGKQYYGRGPIQLTWNYNYGQCGNALGIDLLNNPDLVEKDP
VISFKTAIWFWMTPQSPKPSCHDVITGEWSPNPADSAAGRVPGYGLITNIINGGLECGGG
PDPRVEDRIGFYKRYCDIFGVDYGDNLDCSNQKPFGNGLVDSM
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgggagctttcgcttttataatttcttcttttctgttgacatcctttttgcttagtatt
tcagctgagcaatgtggatatcaagccgggggtgcattatgccctgaaggccaatgttgc
agtcaatggggctggtgtggtaccacagtcgagtattgttgtgatggttgccaaagccaa
tgtaaccctgatgatatatgtggcagtggtggaggtggaggcggtggcggaggtggcggc
ggaggtggaggtggcggcggtggtggaggagaaggcggtggagacctcagtagaatcatc
tcaaaatcattatttgaagggatgcttatacatagaaatgatgctgcttgtcctgctcgc
ggattttatacatatgaggctttcattacagcagcccaagcttttcctacctttggaacc
actggagatgatgctacacgtaaaagagagattgctgcattcttcggacagacatctcat
gaaactacaggagggtggccaacagcaccgggtggaccatatgcttggggatattgcttt
ttggaggaattaagtccatcagactattgttcttcaagtgccaaatatccttgtgctcct
gggaagcagtattatggcagaggtcccatccaacttacatggaattacaattatgggcag
tgcggtaatgccctaggcatagacttgttgaacaatccagacctagtggagaaagatcca
gtcatttccttcaagacagcaatctggttctggatgactccacaatctccaaagccctct
tgccacgacgtcatcactggagaatggtcacccaaccctgctgattcggcggcaggaaga
gttccaggttatggcttgataacaaacatcatcaatggtggtcttgaatgtggtggaggt
cctgatccacgggttgaagatcggattgggttctacaagagatattgtgatatatttgga
gttgactatggtgacaatcttgactgcagtaatcaaaagccatttggaaatgggctggta
gattctatgtaa
DBGET
integrated database retrieval system
