Manihot esculenta (cassava): 110613859
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Entry
110613859 CDS
T05761
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 15a
KO
K14972
PAX-interacting protein 1
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mesc03036
]
110613859
Chromosome and associated proteins [BR:
mesc03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
MLL3/MLL4 complex
110613859
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KIX_2
KIX
DUF4389
Motif
Other DBs
NCBI-GeneID:
110613859
NCBI-ProteinID:
XP_021610908
LinkDB
All DBs
Position
4:31208669..31219703
Genome browser
AA seq
1347 aa
AA seq
DB search
MDNTNWRPTAQGGEPAIDTGDWRAQLPPDSRQRIVNKIMETLKRHLPFSGQEGLDELKKI
AERFEEKIYTAATSQSDYLRKISLKMLTMESKSQKPQDHNQGQSLPLPLPVNQTRQQLLP
QNIQNNITSIGVQSSPSLTSVLPQVSGLTQTSIPSVVGQTPNMQNISGVPQNTAGNSTGQ
GVPSNMFANSQRQMAGRQQVVSQQQQQQQQSQNPQQYLYQQQLQQQLMKQKIQQANRPHS
LVQSHIQQQQQQQQNLLQPTQLQSSQQSSMQTSSVMQPTMMQSVISGLQQSQPPPVQQST
QSMLQQHPHSVLRQQQQLQQPASIHQQQTQMMQQQLLPPQHQQQQLMGQQPNGTNMQQNQ
LIGQPNNVGDIQQQQQQQQRLLSQQNNLQSLPQQQQHQQQQLMAQQNNLPSVHQQQLGSQ
SNVPGLQQQQQQQLLGTQNGNSSMQTNQLSMHMMQQPKVTMQQQTSTNMLTTQGQQSQTQ
VPQQQLMSQIQSQPTQLQQQMGLPQQSNPLQLDLQQRLQGSSQGPGSLLQQQNVVDQQKQ
LYQSQRPLQEASSTSVDSTAQTGHANGGDWQEEVYQKIKVMKELYLPELNEMYQKIAAKL
QQHDSLPQQPKSEQLEKLKIFKAMLERILSFLQVSKNNILPGFKEKLGSYEKQITNFINT
NRPRKPMPSLQQGQLPQSHIQQPQSQVPQIQSHENQMNPQMQSVNLQGSVPTMQQNNMSS
LQHNSLPSLSGFSSSQQNTMNSLQPASNLDSGQGNALSSLQQPVVGSLQQNSGSAPQQAS
INNLSSQSGLNMLQPNISLQSNPNMLQHQHLKQQQDQQILQSQQLKHQLQQRQMQQQLMQ
KQHLLQQQQQQLHQQAKQQMPAQMQGQQMPAQMQGQQIQQAHQMNDVNEIKIRQGMGVKP
GFQQHLPAGQRTAYSHQQMKSGSSFTMSSTQLLQAASPQLSQHSSPQVDQQNLQTSLTRT
GTPLQSANSPFVIPSPSTPLAPSPMPGDSEKQITGISSLSNAGNVGQQQTTGAQATAPSL
AFGTPGMSASPLLAEFTGSDGAHGNALTTTSGKSSVTERPLERLIKAVKSLSPNALSASV
SDIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTNCRLQAINFITQDGMTGTRKMKRYTS
AMPLNVVSSASSISDSFKQLNGPETSDLESTATSSVKRPRIEANHALLEEIREINQRLID
TVVDISEEDVGPTAAAPSAEGSEGTIVKCSFSAVALSPNLKSQYASAQMSPIQPLRLLVP
TNYPNCSPILLDKLPVEISKEYEDLSVKAKSRFSISLRSLSQPMSLGEIARTWDVCARAV
ISDHAQQSGGGSFSSKYGTWENCFSAA
NT seq
4044 nt
NT seq
+upstream
nt +downstream
nt
atggacaacactaactggaggcctactgcccaagggggagaacctgcaattgacactggt
gattggagagctcagttgccacctgattcacgacagagaattgttaataaaataatggaa
acattgaaaagacatcttccattttctggtcaagagggactagatgaactcaagaaaatt
gctgagcgatttgaagaaaagatttataccgctgccacaagtcagtcagattatctgcgg
aaaatatcattgaagatgcttacaatggagtccaaatcccaaaagccccaagatcacaat
caagggcagtcgcttcctcttccattgccagttaatcagacgcgtcagcaattgttaccc
cagaacattcagaataatatcacatctattggggttcaaagttctcccagtttaacatct
gtactgcctcaagtttctggtttaactcagacttccattcccagtgttgttggccagact
cctaacatgcagaacatttctggagttccacaaaacacagcagggaattctacaggacaa
ggggtgccttccaatatgtttgccaattctcagagacaaatggcaggaaggcaacaggtt
gtttcccaacagcagcagcaacaacaacaatcccaaaatcctcagcagtacctttatcag
caacaattacaacaacaacttatgaagcagaagatccagcaagcaaatcgaccacattca
cttgtgcaatctcatatccagcaacagcaacagcagcagcaaaacctattacagccaact
cagttgcaatcttctcaacaatctagcatgcaaacatcatctgttatgcagcctactatg
atgcaatcagtaatttctggtcttcaacagagtcagcctcctcctgttcaacaatcaacg
caatccatgcttcaacagcatccacactcagtcctcaggcagcagcagcaactccaacag
cctgctagcattcatcaacaacaaacacaaatgatgcagcagcaactgttgcccccccag
catcagcagcagcagctaatgggccaacaacctaatggcaccaatatgcagcaaaatcag
ttaattggacaaccaaacaatgttggggacatacagcagcagcagcagcagcagcagaga
ttactgagccagcagaataaccttcaaagtctgcctcagcagcaacaacaccagcagcag
cagttaatggctcagcaaaataacctccccagtgtacatcaacagcaattaggctcgcaa
agtaatgtccctggtttacagcagcagcaacagcagcagttgcttggtacccagaatggc
aactcaagcatgcaaactaatcagctctctatgcacatgatgcaacagcccaaggttaca
atgcagcagcaaacttcaactaatatgttgacaactcaagggcagcagtcacaaacccag
gttccacagcaacaactgatgtcacagatccaatcacagccaactcagttacaacaacag
atgggtttgccacagcagtctaatccattacaactagatctgcagcaaaggctccaagga
tcaagtcaaggaccgggttccttgcttcaacagcagaatgtagttgatcaacaaaagcaa
ttgtatcaatcacaaagacctcttcaagaggcatcatcaacatctgtggattcaactgca
caaactggacatgcaaatggaggtgattggcaagaggaagtctaccaaaagatcaaagtc
atgaaggaactgtacttgcccgaactaaatgaaatgtaccagaaaattgctgcaaagtta
cagcagcatgattctcttccacaacaacccaagtcagagcagctcgagaagctaaaaata
tttaaggccatgttagagcgcattttatcattcttgcaagtttccaaaaataatattttg
cctggttttaaggagaagttgggttcttatgagaagcagatcacaaattttataaatact
aatagacccagaaagcctatgccatcacttcaacaagggcaacttccccaatcccacatc
cagcaaccacaatctcaagttcctcaaattcagtcccatgaaaatcaaatgaatcctcaa
atgcaatcagtgaacttgcaagggtctgtgccaacaatgcagcagaataatatgtcaagt
ttgcagcataattctctgccttctttatcaggcttttcctcatcacagcaaaacacgatg
aattccctgcagccagcttccaatttagattcaggccaaggaaatgcattgagctcattg
caacagccagtagtaggttctctacaacagaatagtgggagtgctccccaacaggccagt
ataaataatctgtcatcacagagtgggttaaatatgctgcagccaaatatttcccttcag
tcaaatcccaatatgcttcaacatcagcatctaaaacaacagcaagatcagcagatcttg
cagagtcaacagctcaaacaccaattacaacagcgccagatgcagcaacagttaatgcag
aagcagcacttattgcagcagcagcagcagcaattgcaccagcaggcaaagcagcagatg
cctgctcaaatgcagggacagcaaatgcctgctcaaatgcagggacagcaaatacaacag
gcacatcagatgaatgatgtcaatgagattaagatcaggcaggggatgggtgttaagcca
ggctttcagcagcatctccctgctggtcagcgcacagcttattcccatcaacagatgaaa
tcaggatcttcgtttactatgtcttctactcagctgcttcaggcagcctctcctcaatta
tcacagcattcgtctccacaagttgatcagcaaaatctacaaacatctctaacaagaact
ggaacccctttgcagtctgcaaattctcctttcgttatcccatctccttcaactccttta
gctccatcccctatgccaggagattctgagaaacaaataactggtatttcctcactttca
aatgctggaaatgttggacagcaacaaacaactggtgctcaagctacagctccatccctt
gcatttggcactcctgggatgtcagcttcacctttgcttgcagagtttactggttctgat
ggtgctcatggcaatgctttgaccactacttcgggcaagtcaagtgtcacagagcgacct
cttgagcgcctgattaaagcggttaagtctctgtcccctaatgcattgagtgcctcagtc
agtgacattggctcagtagttagtatgatagacagaattgctggatcagccccaggcaat
ggatctagagctgcagttggtgaggatttggtagcaatgactaactgtcgtcttcaggca
ataaattttatcacccaagatggaatgactgggacaagaaaaatgaagcgatatacaagt
gccatgcccttaaatgttgtatcatcagctagcagcataagtgacagttttaagcagttg
aatggtccagagacatctgatttggagtctactgccacatcaagtgtcaagaggcctaga
attgaggctaatcatgccctactggaagagatacgggaaataaatcagcgacttatagac
acagtggtggatattagtgaggaagatgttggtccaactgcagcagctccttctgctgaa
gggagtgaaggaaccattgttaagtgttcttttagtgctgtagctctgagtccaaacttg
aaatcgcagtatgcttcagcacaaatgtcaccaattcagcccctcagattgcttgtgcct
acaaattatccgaattgctccccgatactattagacaaattaccagttgaaatcagtaag
gagtacgaggatctttcagtaaaggcaaagtcaaggtttagcatttctctccgcagcctt
tcacaacctatgtcacttggagaaattgcaaggacctgggatgtttgtgctcgggcagtt
atctccgatcatgcgcagcagagtggaggaggaagcttcagctctaaatatgggacatgg
gaaaactgctttagtgcagcatga
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