Manihot esculenta (cassava): 110613889 Help Entry 110613889         CDS       T05761                                  Name (RefSeq) coatomer subunit alpha-1   KO K05236   coatomer subunit alpha Organism mesc  Manihot esculenta (cassava) Brite KEGG Orthology (KO) [BR:mesc00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:mesc04131]     110613889   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:mesc04147]     110613889 Membrane trafficking [BR:mesc04131]  Endoplasmic reticulum (ER) - Golgi transport   Retrieval pathways    Coat protein complex I (COP-I)     110613889 Exosome [BR:mesc04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    110613889   Exosomal proteins of bladder cancer cells    110613889 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  COPI_C B-prop_COPA_B_2nd Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 WD40_Prp19 Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd WDR55 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR36-Utp21_1st TPR_COPA_B EIF3I WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_EIPR1 WD40_MABP1-WDR62_1st WD40_MABP1-WDR62_2nd Beta-prop_SCAP ANAPC4_WD40 Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_SPT8 Beta-prop_WDR41 NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_Aladin Beta-prop_IFT140_1st Beta-prop_WDR19_1st Beta-prop_RIG_2nd Beta-prop_At4g14310 Zn_ribbon_19 Aa-Ago_N Motif Other DBs NCBI-GeneID:  110613889 NCBI-ProteinID:  XP_021610975 LinkDB All DBs Position 4:28694267..28700081 Genome browser AA seq 1217 aa AA seqDB search MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH KSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILR LSQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNDTKAWE VDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHP EMNLLAAGHDSGMIVFKLERERPAFAVSGDSLFYAKDRFLRYFEFSTQRDTQVIPIRRPG TTSLNQSPRTLSYSPTENAVLICSDVDGGSYELYVIPKDSIGRGDNVQEAKRGAGGSAIF VARNRFAVLDKSSNQVVVKNLKNEVVKKSGLPIAADAIFYAGTGNLLCRAEDRVVIFDLQ QRLVLGDLQTPFVKYIVWSSDMESVALLSKHAIIIASKKLVHQCTLHETIRVKSGAWDDN GVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSGNTIFCLDRDGKSRTIVIDATEYI FKLSLLRKRYDHVMSMIRNSQLCGQAMIAYLQQKGFPEVALHFVKDERTRFNLALESGNI QIAVASAKEIDEKDHWYRLGVEALRQGNAGIVEYAYQRTKNFERLSFLYLITGNLEKLSK MLKIAEVKNDVMGQFHNALYLGDVQERVKILESAGHLPLAYITAKVHGLEDLAERLASEL GDNVPSVPGGKVPSLLMPPPPVMCGSDWPLLRVMKGIFEGGLDNMGRGVAEEDEEVGEGD WVNELEMVDEDGSQNGDVTAILEDGEVAEENDEGGWDLEDLELPPEADTPRASAIARSSV FVAPSPGMPVSQIWVQRSSLAAEHAAAGNFDTAMRLLNRQLGIRNFNPLRSMFLDLHSGS HSYLRAFSSTPVISLAVERGWNESASPNVRGPPALVFNFSQLEEKLKAGYRATTTGKFTE ALRLFLSILHTIPLIVVESRREVDEVKELIVIVKEYVLGLQMELKRREMKDNPVRQQELA AYFTHCNLQMPHLRLALQNAMTVCFKARNLATAANFARRLLETNPTIENQAKAARQVLQA AERNMTDASELNYDFRNPFVTCGATYVPIYRGQKDVSCPYCSSRFVPSQEGKLCTVCDLA VVGADASGLLCSPSQVR NT seq 3654 nt NT seq  +upstreamnt  +downstreamnt atgttgacgaagtttgagacgaagagtaatagagtgaagggactgagtttccatagtaag agaccgtggatccttgcgagtcttcatagtggcgtgatccagctatgggactacagaatg gggacattaattgataggttcgacgagcacgacgggcctgttcgcggagtccatttccac aaatctcagcctctattcgtgtctggaggcgatgattacaagattaaagtttggaactac aagatgcataggtgtctgtttacacttcttggacatcttgattacatccgtactgttcag tttcatcatgagtacccatggattgtgagtgccagtgacgatcagacaatccgtatttgg aactggcaatcacgtacctgcatttctgtgttgacgggccacaatcattatgttatgtgt gcctcattccatcccaaggaagatcttgtagtttcagcctctctagatcagactgtccgt gtttgggatattggtgctctgagaaagaaaactgtgtcccctgctgatgacattctgcgg ttgagtcagatgaacacagacctttttggtggggtcgatgctgttgttaagtatgtcttg gaaggtcatgatcgaggagtgaactgggctgcatttcaccccactcttcccttgattgtc tcaggagcagatgatcgccaggtgaaattatggcgcatgaatgacacaaaggcttgggaa gtggacacattgagagggcacatgaataatgtgtcatgtgttatgttccatgccaaacag gatatcattgtttcaaattcagaggataaaagcatccgtgtttgggatgtaactaaacga acaggagttcagactttccgtcgagagcatgatcgtttctggatccttgcttctcaccct gagatgaatctccttgctgcaggtcatgacagtggcatgattgtttttaaattagagaga gaacgacctgcctttgcagtcagtggtgattctttgttctatgccaaagatcgctttttg cggtactttgaattttcaactcaaagggacactcaagttattcccatccggcgacctggt accaccagcctgaatcaaagtccaaggacgctctcttacagccctacagagaatgctgtt cttatttgctcagatgtggatggtggatcttatgagttgtatgtcataccgaaggacagc attggtaggggtgataatgtgcaggaggcaaagaggggtgctggaggatcagccattttt gtggctcggaatagatttgctgtgcttgataaaagtagcaaccaagttgtagtaaaaaac ctgaagaatgaagttgtcaaaaagagtggtctccccattgctgcagatgcaatattctat gctgggacgggcaacttgctttgcagagcagaggatagagtagtcatatttgatcttcag caaaggcttgttcttggggatcttcaaacaccttttgtcaaatacattgtttggtctagt gacatggagagtgttgccttgctcagcaaacatgccatcatcattgctagcaagaagctt gtgcaccagtgcactcttcatgagacaattcgggtgaagagtggagcctgggatgataat ggtgtttttatttatacaaccttaaatcacataaaatactgcctccctaatggagatagt ggcataatcagaactcttgatgtcccgatatacattaccaaggtttctggaaataccata ttttgtttggatcgggatgggaagagtagaactattgtcattgatgcaacagaatacatc tttaaactttcccttttgaggaagagatatgaccatgttatgagcatgattaggaactct cagctttgtgggcaggcaatgattgcttatttgcaacagaagggttttcctgaagttgct ttgcattttgtgaaggatgagaggacacgatttaatttggcccttgagagtggaaatatt cagattgctgttgcttcagcaaaggaaattgatgagaaagatcactggtatagattggga gtggaagcgcttcgccaaggtaatgctggtattgttgagtatgcctaccagaggactaaa aactttgagaggttatctttcctttatctcataactgggaatctggaaaagctttccaag atgctgaaaattgctgaggttaagaatgatgtcatgggtcagtttcacaatgccctgtat ttgggtgatgtccaagagcgtgtcaagatcttagagagtgctggtcatttgccgcttgct tatataactgctaaagtccatgggttggaggatcttgctgaacgtctggcttctgagtta ggagataatgttccatctgtgccagggggtaaagtcccatctcttctgatgcctcctcct cctgttatgtgtggtagtgactggccccttctaagagtcatgaaaggtatttttgaaggt ggtctagataatatgggcagaggtgttgctgaagaagatgaagaggttggtgaaggggat tgggttaatgaactggaaatggttgatgaggatggctcacaaaatggggatgttacagca attttggaggatggggaagtggctgaagaaaatgacgagggaggatgggaccttgaagac ctggagcttccccctgaggcagacacacctagggcttctgccattgcccgctcttcagtt tttgtggcaccatctcctggaatgcctgtaagccagatttgggtccagagatcatcactt gctgctgaacatgctgcagctggcaatttcgatacagctatgcgattgctcaaccggcaa cttggaattcgaaacttcaatcctttgaggtccatgtttcttgatcttcattcaggtagc cattcatatttgcgtgcattttcatctactccagtgatatcactagctgttgaacgagga tggaatgagtctgctagccctaatgtgagaggcccacctgcgttagtgttcaatttctcg cagttggaggagaagctcaaggctggctacagagccacaacaacagggaaattcactgag gcacttagactctttctcagcattcttcacacaattcccttgattgttgttgaatcaaga agagaggttgatgaagtcaaggaattgattgttatagtgaaagaatacgttctgggtctg cagatggagcttaaaaggagggaaatgaaagacaatccagtccgccaacaggagctagct gcttacttcacccactgcaaccttcaaatgcctcatttaaggcttgctttgcaaaatgca atgactgtatgcttcaaggcaaggaaccttgccactgcagctaactttgccagacggctg ttggagacaaaccccacaattgagaaccaggcaaaggctgccagacaagtgttacaggct gcagaaaggaatatgacagatgcctctgagctgaattatgatttcagaaacccatttgtg acatgcggtgcaacatacgttccaatataccgaggacaaaaggatgtctcttgcccatat tgtagttcacggtttgtgccaagccaagaagggaagttgtgtactgtttgtgatctggca gttgttggggcagatgcttcaggattgctctgttctccttcccaggtgcgataa

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