Manihot esculenta (cassava): 110614002
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Entry
110614002 CDS
T05761
Name
(RefSeq) proteasome subunit alpha type-6
KO
K02730
20S proteasome subunit alpha 1 [EC:
3.4.25.1
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
110614002
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mesc01002
]
110614002
09182 Protein families: genetic information processing
03051 Proteasome [BR:
mesc03051
]
110614002
Enzymes [BR:
mesc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.25 Threonine endopeptidases
3.4.25.1 proteasome endopeptidase complex
110614002
Peptidases and inhibitors [BR:
mesc01002
]
Threonine peptidases
Family T1: proteasome family
110614002
Proteasome [BR:
mesc03051
]
Eukaryotic proteasome
Core particles (20S proteasome)
alpha type subunits
110614002
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Proteasome
Proteasome_A_N
Motif
Other DBs
NCBI-GeneID:
110614002
NCBI-ProteinID:
XP_021611137
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All DBs
Position
4:complement(34386327..34392092)
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AA seq
246 aa
AA seq
DB search
MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSVCVVTQKKVPDKL
LDHTSVTHLFPITKYLGLLATGMTADARTLVQQSRNEAAEFRFRYGYEMPVDVLAKWIAD
KSQIYTQHAYMRPLGVVAMVLGIDDEYGPRLYKCDPAGHYFGHKATSAGLKEQEAINFLE
KKMKNDPQFTYEETVQTAISALQSVLQEDFKATEIEVGVVRKENPVFRVLSTEEIDEHLT
AISERD
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgagcagaggaagtggaggaggatacgatcgtcacattacgattttttcacctgagggc
cgtctttttcaagtggagtatgcttttaaggctgttaaggctgctgggatcacctcaatt
ggtgttcgtggaaaggattctgtctgtgtagtgactcagaagaaagttcctgacaagctt
ttggatcatacaagtgtcactcatcttttccccattacaaagtatcttggtttgctagca
actggcatgacagctgatgcaaggactttggttcaacaatctaggaatgaagctgctgag
tttcgcttccgatatggatatgagatgcctgtggatgttttggctaaatggatagctgac
aaatcacaaatttatacacaacatgcttatatgagaccacttggagtagttgctatggtt
ttgggtattgatgatgaatatggacctaggctctacaaatgtgacccagctggccactac
tttggccacaaggctacaagtgcggggttaaaagagcaagaagcaatcaatttcttggag
aagaaaatgaagaatgaccctcaatttacctacgaggaaacagtgcagactgcaatctcg
gccctgcaatcagttttacaggaggattttaaggccacagagattgaggttggagtggtg
aggaaggagaatccagtcttcagagtgttatccaccgaagagattgatgagcacttgact
gctataagcgagcgagactaa
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