Manihot esculenta (cassava): 110614034
Help
Entry
110614034 CDS
T05761
Name
(RefSeq) sm-like protein LSM1B
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110614034
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mesc03019
]
110614034
Messenger RNA biogenesis [BR:
mesc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110614034
mRNA degradation factors
5'-3' decay
Lsm complex
110614034
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
110614034
NCBI-ProteinID:
XP_021611176
LinkDB
All DBs
Position
4:34458682..34462814
Genome browser
AA seq
128 aa
AA seq
DB search
MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLLGILRSFDQFANAVLEGACERVIVGDL
YCDIPLGLYVIRGENVVLIGELDLEREELPPHMTRVSAAEIKRAQKAEREATDLKGTMRK
RMEFLDLD
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgggcgggacctgaagatatttacctttctacttctcttgctagctatctcgat
aagaagctacttgtgcttctgcgagatggccgaaagctactgggaatactgcgttctttt
gatcaatttgccaatgctgttcttgagggtgcatgcgaaagagttattgttggtgatctc
tattgtgatatccctttaggtctatatgttatccgaggcgagaatgttgttttaattgga
gagctggatttggagagggaagaacttcctccacatatgacccgggtttcagcagcagaa
attaaaagggcacaaaaagctgaaagggaagctacggatctgaaaggtacaatgaggaag
agaatggagttcctcgatttggactag
DBGET
integrated database retrieval system