Manihot esculenta (cassava): 110614067
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Entry
110614067 CDS
T05761
Name
(RefSeq) probable RNA 3'-terminal phosphate cyclase-like protein
KO
K11108
RNA 3'-terminal phosphate cyclase-like protein
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
110614067
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mesc03009
]
110614067
Ribosome biogenesis [BR:
mesc03009
]
Eukaryotic type
90S particles
Other 90S particles
110614067
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RTC
RTC_insert
Motif
Other DBs
NCBI-GeneID:
110614067
NCBI-ProteinID:
XP_021611222
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All DBs
Position
4:5668441..5674006
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AA seq
377 aa
AA seq
DB search
MGKMTYKRLKGSQNLRLRLLLATLSATPVLIEDIRADETIPGLRPHEISFLRLLERISDD
CLIEINETGTKFKYKPGILMGGKHIVHDCGVSRSIGYFLEPLVVLGLFAKKSLMIRLKGI
TNDSKDPSVDTFRSTTLPMLKQFGVPSEGLELKIESRGSPPHGGGEVVLSVPVVQSLQAV
TWIDEGMVKRIRGVTYSTKVSSQFENTMIHAARGIFNRLLPDVHIFTDHKAGPQAGNSPG
YGISLVAETTSGCFISADTAISYVRGDDIGEMEDERKELMPPENVGEQIASILLEEIEQG
GVVDSTHQGLLFILCAICPQDVSKIRVGKLSPYGIETLRHIKEFLGVKFVIKPDPSTGTV
ILKCVGCGLKNLSRKIS
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atggggaagatgacttataagaggttaaaaggaagccaaaatctccgcctcagactgcta
ttagcgaccctctctgctactcctgttctcattgaggatattcgagctgacgagaccata
ccaggactccgtcctcacgaaatctctttcctccgcctccttgagagaatctcggatgac
tgccttattgaaatcaatgaaaccggcacaaagtttaaatacaaacctggaatcttgatg
ggtgggaaacatattgtgcatgattgtggtgttagtcgatcaattggttatttcctagag
ccgttggtagttcttgggttgtttgcaaagaaatcccttatgataaggctcaaaggaatt
acaaatgattcaaaggacccatctgttgatacttttcgctctactaccttacccatgttg
aagcaatttggagttccttcagaaggattggaactgaaaatcgagagtcgtggatctccc
cctcatggaggtggtgaagttgttttatcagttcctgttgttcaaagtttacaggcagta
acctggattgatgagggaatggttaagaggattagaggagtcacttactcaactaaagta
tcttctcagtttgaaaatacaatgatacatgctgcccgtggaatctttaatcgtttgctt
cctgatgttcatatatttactgatcataaagctggtcctcaagctggaaattctcctggt
tatgggatttccttggtcgctgaaactacttcaggctgcttcatctctgctgatacagca
atttcatatgtgcgcggggatgatataggtgaaatggaagatgaaaggaaagagttgatg
ccgccagagaatgtaggcgagcaaattgcttctattcttcttgaagaaattgagcaaggt
ggagttgtagattcaacgcaccagggtctattatttattctgtgcgcaatatgtccacaa
gatgtgtcaaagattcgtgtggggaagctctcaccttatggaatagaaacactgagacat
attaaagaatttctgggggttaagtttgttattaagccagatccatcaacagggacagtt
atactaaaatgtgttgggtgtggattgaagaacctttctagaaagatttcataa
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