Manihot esculenta (cassava): 110614172
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Entry
110614172 CDS
T05761
Name
(RefSeq) F-box/LRR-repeat protein 4
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mesc04121
]
110614172
Ubiquitin system [BR:
mesc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
110614172
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DUF7885
LRR_6
LRR_4
LRR_At5g56370
LRR_RPS2
LRR_At1g61320_AtMIF1
LRR_EndoS
LRR_14
F-box_5
UPAR_LY6_2
Motif
Other DBs
NCBI-GeneID:
110614172
NCBI-ProteinID:
XP_021611355
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Position
4:complement(35656469..35658341)
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AA seq
407 aa
AA seq
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MDSSICINESLTDDELRSILSKLESDKDKEIFGLVCKRWLRLQSTERKKLAARAGPHMLQ
KMAARFSRLIELDLSQSVSRSFYPGVTDSDLSVIANGFKCLRVLQLQNCKGITDSGMRSI
GCGLPSLQSLDVSYCRKLTDKGLLSVAEGCRDLLYLHLAGCRFVTDGVLKALSKNCPNLK
ELGLQGCTNITDHGLTDLVSGCQRIQYLDINKCSNVGDIGISNLSKACSYCLKTLKLLDC
YKVGDESVLSLAKFCDNLETLIIGGCRDISDKSIKSLASACKNSLKNLRMDWCLSISDSS
LSCILTECRNLEALDVGCCEEVTDAAFQGLGTIKSELRLKVLKVSNCPKITVSGIGMLLE
KCSTLEYLDVRSCPHITKSGCDEAGLQFPERCKVNYTGSLNEPYLLA
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggattcttcaatttgcataaacgagtcgctgacagatgacgagctgaggtcgattttg
tcaaagctggagagcgacaaggataaggagatattcgggttggtatgcaagagatggctt
cgtttgcagagcactgaaaggaagaaacttgctgctcgtgcgggacctcacatgcttcag
aagatggctgccaggttctctcgcttgattgaattggatctttctcagtcagtttccagg
tccttctatcctggtgttactgactctgatctttcggtcattgctaatgggttcaaatgc
ttgagggtcctccaattgcagaattgtaaaggaattactgatagtgggatgcggtcaatt
ggatgtggtctgccttctctacagtctttggatgtatcatattgcagaaagctaacagat
aaggggttgttatctgttgctgaaggttgtagagatctactgtacctacatcttgctgga
tgcagattcgtcactgatggtgtgctaaaagctctttctaagaactgtcctaatctaaaa
gagttgggcctgcaaggatgcaccaacataactgaccacgggctaacagatcttgtcagt
ggttgccagcgaatccagtacttagacatcaataagtgcagcaatgttggggacattgga
atttccaatctttcaaaggcatgttcatattgtctcaagacactgaagttgttggattgc
tacaaagttggggatgaatctgtattatccttagccaaattttgcgataatcttgaaacc
cttattatagggggctgtcgagacatctctgataagtctataaaatcattggcttcagcc
tgtaaaaatagtttaaagaatttgcgtatggactggtgtttaagtatctccgactcttca
ttaagctgtatcctcactgagtgcagaaatctagaggctcttgacgttggatgctgtgag
gaggttacagatgctgcttttcaaggtttaggaactataaaaagtgaattaaggctgaag
gttttgaaagttagcaactgtccgaagataacagtgtctgggataggcatgcttttggag
aagtgcagcactttagagtaccttgatgtgagatcctgccctcatattacaaagtcaggt
tgtgatgaggctgggttgcagtttcctgaacggtgtaaagtaaattacacaggaagcttg
aatgagccatatcttctggcttga
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