Manihot esculenta (cassava): 110614253
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Entry
110614253 CDS
T05761
Name
(RefSeq) polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc00040
Pentose and glucuronate interconversions
mesc01100
Metabolic pathways
Module
mesc_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110614253
Enzymes [BR:
mesc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
110614253
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Nab2-zf4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
110614253
NCBI-ProteinID:
XP_021611433
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Position
5:complement(20858604..20860067)
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AA seq
392 aa
AA seq
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MGRQHSFPFLVAILTYLFTSSLSNAAHYNVLYYGAKPDGRTDSTKAFLAAWIQACGSVRP
ATVYVPAGRFFLRNIVFQGPCKNGAIFFRIVGTLVAPSDYRVIGNAGNWLLFQFVNGVTV
YGGVLDGQGPALWACKASGRNCPTGATSLAFSNSNNIAISRLISLNSQMFHIVINGCHNV
KVQGVTVSASGNSPNTDGIHVQLSSSVAILNSWIGTGDDCISIGAGTSNMWIERVACGPG
HGISIGSLGKELQEPGVENVIVKSVVFTGTQNGLRIKSWARPSNGFVRNIRFRDAVMKNV
QNPIIIDQNYCPNNINCPNQESGIKVSDITYHGIWGSSATPVAVKFDCSRKSPCTGIYLG
DVNLTYRNQPSEASCKNADGVAIGFVQPSSCL
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgggcagacaacatagctttcctttccttgttgcaattctcacctatctctttacttca
tctttatcaaatgcagcacattataatgtcctatattatggagccaagcctgatggcaga
actgattccacaaaagcctttcttgctgcctggatacaagcttgtggatcagttaggcca
gccaccgtgtatgtgcctgcagggaggttctttctgcgaaatatagtgttccagggtcca
tgcaagaatggtgcgatattttttcgcatagttggtacacttgtggctccatcagattat
cgagttattggtaatgcagggaattggcttttatttcagttcgtcaatggtgttacagtt
tatggtggagttcttgacggacaaggtcctgctttgtgggcttgcaaggcatctggcagg
aattgccccaccggtgccacttcactggcgttttccaattcaaataatatagcaatcagt
agactaatttcactgaacagccaaatgttccacattgtcatcaatggctgccacaacgtg
aaagtgcaaggtgtgaccgtgtctgcctctggcaacagccccaacaccgatggcattcac
gtacaattgtcgagtagtgtcgcaatcctcaactcctggattggaactggcgatgattgt
atctcaatcggtgctggcaccagtaatatgtggattgaaagagtcgcatgtggccctggc
catggaatcagtattgggagcctgggaaaggaacttcaagagccaggagtagagaatgtg
attgttaaatctgttgtatttactggaactcagaatggattgagaatcaagtcttgggcc
aggcctagcaatggcttcgtgagaaacatacgtttccgagatgctgttatgaaaaatgtc
cagaacccaattatcatcgaccaaaattactgtcctaacaacataaactgtcctaatcag
gaatctggaattaaagtgagtgatattacatatcatggtatctggggatcatcagcaaca
ccagtggcagtgaagtttgattgtagtaggaagagcccatgcactggaatctatctgggg
gatgtgaatctgacatacaggaatcagccatctgaagcatcatgcaaaaatgccgatgga
gtagctattggtttcgttcagccaagtagctgtctgtag
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