Manihot esculenta (cassava): 110614300
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Entry
110614300 CDS
T05761
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog isoform X1
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mesc03016
]
110614300
Enzymes [BR:
mesc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
110614300
Transfer RNA biogenesis [BR:
mesc03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
110614300
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
Methyltransf_25
Methyltransf_31
Methyltransf_12
Motif
Other DBs
NCBI-GeneID:
110614300
NCBI-ProteinID:
XP_021611493
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Position
5:916904..919745
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AA seq
443 aa
AA seq
DB search
MEENRCKFWLPRKNRSCANAPLNGSPFCGNHKPRSDSQWIPCPIDPSHSVLQENLEGHVK
RCPLLKQTQSLSLQPYYQKGINAGKEEDNAITSEMKRIAVYSMTVSEFYELIKKIESIHA
TICDDISESYKIPEACNMWIKREVDSKLPFQEKHVKQQASIIGNLEYFGVINSSLVKEQC
DVEGISLDKIDSRPAVVEFGAGRGYLTQMLADCYGIDRVFLVERKSYKLKADRSLRQKES
LILERLRIDIEDLNLNAVESLRGVPFLAIGKHLCGPATDLTLRCCLSEQDSERSMEQCHD
NDSLKGIAIATCCHHLCQWKHYANKKFMVDLGITKEEFHAITWFTSWAVDADHGSDLSVD
SSLLLQSLEEEQHGGDVNGIEDVVRNMKAVERAVLGFMCKQIIDMGRMMWARERGLETQL
VKYVPSSISPENHLLIAKHAKCS
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggaggagaaccgctgcaaattctggctccccagaaagaatcgatcctgtgctaatgct
cccctcaacggttctcccttctgtggcaaccacaagccgaggtctgatagccagtggatc
ccttgcccaatcgacccttcccactctgttcttcaagaaaacctcgagggacatgttaaa
agatgcccattattgaaacaaacccaatccttgtcccttcagccatattaccagaagggc
attaatgctggcaaagaagaagacaatgccattacatcggaaatgaagaggattgcagtt
tatagcatgactgtatctgaattttatgaattaataaagaagattgagtccattcatgca
acgatatgtgatgatatttcggaatcgtataagattcccgaggcttgtaacatgtggatt
aagagagaagtagacagtaaattaccatttcaagagaaacatgtcaagcaacaagcatca
attattggaaacttggagtatttcggggtgatcaattcttctcttgtaaaggaacaatgt
gacgttgagggtataagccttgacaaaattgattctcgccctgcagtggttgaatttgga
gcagggagaggatacttgacacagatgttagcagattgttacgggattgatagggtcttt
ttggttgaacgaaaatcatataaacttaaggctgatcgatccttgcgacagaaagagagt
ttgatattggagcgtttgagaattgatatagaggatttaaacttaaatgctgttgagtcc
ctgcgaggagtcccttttctggctattggtaaacatctctgtgggccagcaactgatttg
acactaagatgttgcctctccgaacaagacagtgagcgcagtatggaacagtgccatgac
aatgattcccttaagggcattgctatagcgacatgttgccatcatctttgccagtggaag
cattatgcaaacaaaaaattcatggtggatttggggatcacgaaggaagaatttcatgca
attacgtggtttactagctgggcagtagatgctgaccatggatcagatctctctgttgat
agcagtttgcttcttcagtctctggaagaggaacagcacggaggggatgttaatgggatt
gaagatgttgtgagaaatatgaaagcagttgagagggctgtgttgggttttatgtgtaaa
cagatcattgatatgggaaggatgatgtgggcaagggaacgaggattagagacacagctt
gttaagtatgtcccatcaagcatctctcctgaaaaccatttattgattgctaaacatgcc
aagtgctcatga
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