Manihot esculenta (cassava): 110614385
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Entry
110614385 CDS
T05761
Name
(RefSeq) auxin response factor 9 isoform X2
KO
K14486
auxin response factor
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
110614385
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Gene cluster
GFIT
Motif
Pfam:
Auxin_resp
B3
AUX_IAA
Motif
Other DBs
NCBI-GeneID:
110614385
NCBI-ProteinID:
XP_021611599
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Position
1:complement(40533259..40538128)
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AA seq
704 aa
AA seq
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MAHVETNFGSDSLSRDERGGDDLYTELWKACAGPLVDVPVPGERVFYFPQGHMEQLEAST
NQELTQQIPRFNLPSKILCRVVNIQLLAEQETDEVYAQITLHPEPNQEEPTSPDSRLPEP
KKPTVHSFCKILTASDTSTHGGFSVLRKHATDCLPPLDMNQATPTQELAAKDLHGYEWRF
KHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGDNGELRVGVRRLARQQSLMPSSV
ISRQSMHLGVLATASHAVTTQTLFVVYYKPRTSQFIIGLNKYLEAVNHGFSVGMRYKMRF
EGEDSPERSFTGTIVGVGDVSAQWSGSKWRSLKIQWDEPATIQRPERVSPWDIEPFAASA
SINLPPTVLKSKRPRPLDTPVSEITTNSTTSPFWYRGSAQSHDLSQLGSAAEAQSCEKSQ
VVWSVRQKEIDSSVVNGSIFCNSRVRTEGIWPPSPHMNVSLSLFFDSADNSRTITQSVAS
GYVSPVPLRQTDVLMHDQVEKGKKYENSIGCRLFGIDLTSNSNAAPPLEEALCTTVDPNG
TGGPLAAPGDSDKAQNMDASKSSEEQKQIASDALPKETHGKLGPTSSTRSRTKVQMQGVA
VGRAVDLTVLKGYGDLIKALEEMFEIKGELSTPDKWAVVFTDDEGDMMLVGDDPWPEFCK
MVKKILIYSSEEVKKMSTRSKLHASSLEDEGTIASLDSEHKSET
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atggctcatgttgagactaatttcgggtctgattcgctttctcgtgatgaaagaggagga
gatgatctatatacggaactatggaaggcatgtgcaggtccattggtggatgtcccagtg
cctggagaaagagttttctatttcccacagggtcacatggaacaactggaagcatcaaca
aatcaggaactgactcaacaaatcccgcggtttaatcttccttccaagatcctttgccga
gttgttaacattcaactactggcagaacaagagacagatgaggtttatgctcagatcacc
ttgcacccagaaccaaatcaagaggagcctacaagtcctgactcgcgccttcctgaacca
aaaaagccaactgttcattcattttgcaaaattctaacagcttctgatactagcacccat
ggagggttttctgttcttagaaagcacgctactgattgcttgcctccattggacatgaac
caagcaaccccaactcaggaactggctgctaaagatcttcatggctatgagtggcgattt
aaacacatatttagaggtcaaccaaggagacatttgcttacaactgggtggagtacattt
gttacttctaagagactggttgcaggagatgcttttgtttttctgagaggtgataatggg
gaattgcgagttggcgttcggcgtcttgctcgtcagcaaagcctcatgccttcatctgtg
atatccaggcagagcatgcatttaggagtgcttgctactgcttctcatgctgttacaaca
cagaccctctttgtcgtgtactacaagcctaggacgagccaatttataattggcttgaat
aaatatttggaggctgtcaaccatggattttctgttggcatgcggtacaagatgagattt
gagggagaagactctcctgagaggagtttcacaggaactatagtcggagttggagatgtt
tctgcacagtggtcaggctctaaatggaggtcattgaagatacaatgggatgaaccagca
acaattcaaaggccagagagagtttctccgtgggatatagagccttttgcagcttctgct
tctataaatcttcccccaacagtgttaaagagtaaaaggcccaggcctttggatactcca
gtgtcagaaattactaccaattcaactacttcgcctttctggtaccgtggatcagcccaa
tcccatgatttaagtcaactaggtagtgctgctgaagctcaaagttgtgaaaaaagccaa
gtagtttggtctgtgaggcagaaggaaattgatagcagtgttgtcaatggtagcatcttc
tgtaactcgagggtccgaacagagggcatatggccaccttctcctcacatgaatgtttct
ctcagtcttttctttgattcagctgataacagccgaaccataacacagtctgtcgcctct
ggttatgtgtctcctgttccattaaggcaaactgatgtcctgatgcatgaccaggtggag
aaagggaaaaaatatgaaaattctataggctgccgtttgtttggaattgatttaacaagc
aattctaatgctgctcctcctctagaggaggctttgtgtacaactgttgaccccaatggc
accggaggacctcttgcagccccaggtgattctgataaggctcaaaatatggatgcttcc
aagtcctcagaagaacagaagcaaattgcatcagatgcattgccaaaggagacacatggc
aagctgggtcccacttcttccacaaggtctcgtaccaaggtgcaaatgcaaggagttgca
gttggtcgtgctgttgatctaacagtgttgaaagggtatggagatcttataaaagcactg
gaggaaatgtttgagatcaaaggagagctttccacgcccgacaaatgggctgttgtattt
actgatgatgagggcgatatgatgctcgtgggcgatgatccgtggccggaattctgtaag
atggttaagaagatactaatatattcaagtgaggaagtgaagaagatgagcacaagatcc
aagttgcacgcgtcctctttagaggatgaagggacaattgcaagcttggactctgaacat
aagtctgagacctga
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