Manihot esculenta (cassava): 110614553
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Entry
110614553 CDS
T05761
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT3
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110614553
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mesc04121
]
110614553
Enzymes [BR:
mesc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110614553
Ubiquitin system [BR:
mesc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
110614553
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
DUF7567
FAIM1
DZR
Motif
Other DBs
NCBI-GeneID:
110614553
NCBI-ProteinID:
XP_021611807
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All DBs
Position
1:40633217..40636505
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AA seq
323 aa
AA seq
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MELDSIEIVPSSDLTDEDEIHHHHVQFPSVPKPQSNNNIITNSNSVSSAIQSISVHELLE
CPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCK
YMSLGCPEIFPYYSKLKHEALCNFRPYNCPYAGSECAVVGDIPFLVAHLRDDHKVDMHSG
CTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETEA
RNYSYSLEVGGNGRKLIWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLR
VTGRIWKEQQNPDGGACIPNICS
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggaattggatagcatcgaaatcgtgccatcctcagatttgacagacgaggatgagatc
catcaccaccatgttcaattcccttcagttcctaagcctcaaagtaataacaacatcatc
accaatagtaatagtgtttcctcagcgattcaatccatcagtgtccatgagctactcgaa
tgccccgtttgcaccaattctatgtaccctccaattcatcagtgccacaatgggcatact
ctttgttcaacttgtaaaacaagggtgcataaccgatgccccacttgtagacaagaactt
ggtgacattagatgccttgcattggagaaagtagcggaatcacttgaactgccttgcaaa
tacatgtcacttggatgcccagagatttttccttactacagtaaactcaaacatgaagct
ctatgtaacttcaggccgtacaactgtccatatgctggttctgaatgtgctgttgttggg
gatattccattccttgttgctcatctgagggatgatcacaaagtagacatgcattctgga
tgcactttcaaccatcgctatgtcaagtctaatccccgggaagtggaaaatgcaacatgg
atgttaactgttttccattgttttggccagtatttttgtctgcattttgaagctttccag
cttggaatggcacctgtgtatatggcattccttcgttttatgggagatgagacagaagcc
cgtaactacagctacagcctggaggttgggggaaatggccggaaactcatttgggaaggt
accccacgaagtgttagagatagccacaggaaggttagggatagccatgatggcctcatc
atacagaggaatatggctcttttcttctctggaggggataggaaagagttaaagctgaga
gtgaccgggcgaatatggaaagaacagcagaacccagatggtggggcatgcataccaaat
atctgcagttag
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