Manihot esculenta (cassava): 110614575
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Entry
110614575 CDS
T05761
Name
(RefSeq) vesicle transport v-SNARE 12
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
110614575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mesc04131
]
110614575
Membrane trafficking [BR:
mesc04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
110614575
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
Sec20
YqjK
DUF3792
PLU-1
Fusion_gly
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
110614575
NCBI-ProteinID:
XP_021611831
LinkDB
All DBs
Position
5:complement(10023084..10025888)
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AA seq
223 aa
AA seq
DB search
MSDVFEGYERQYCELSANLSRKCNSTSLLPDGEEKKENISKIKSGLDDCDVLIRKMDLEA
RSLQPNVKAMLLAKLREYKSDLNNLKREIKRITSGNADQAAREELLEAGIADVHAVSADQ
RERLSMSVERLNQSGDRIKESRRTMLETEELGVSILEDLHQQRQTLLHAHNKLHGVDDAI
DKSKKVLSSMSRRITRNKWIVGSVIAALVFAIIVIISFKVSHH
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatgtcttcgaaggatacgagcgccagtactgcgagctctctgcaaatctctct
cgtaaatgcaactccacttctcttcttcccgatggagaggagaagaaggaaaatatctcc
aagataaaatctggactggatgattgcgacgtgttgattcggaaaatggaccttgaggcg
agaagtttgcagccgaatgtgaaggctatgttgcttgctaaattaagggagtataagtct
gatctgaataatctgaaaagggagattaagagaataacgtctggtaatgctgatcaggct
gcccgtgaagagctgttggaggccggaatagccgatgtacacgcggtttctgcagatcag
agagaaagattgtctatgtcagtagagagactaaaccagtctggcgacaggattaaggag
agtaggagaacaatgctggagactgaagagcttggtgtttcaattcttgaagatttgcat
caacagcgccagactctcctacatgctcataataagttacatggagtagatgatgccatt
gataagagtaaaaaagtgttgtcgtctatgtcaagaagaataaccagaaacaagtggatt
gttggctcagtgattgctgctcttgtatttgcaatcatcgttatcatctcatttaaggtt
tctcatcactaa
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