Manihot esculenta (cassava): 110614627
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Entry
110614627 CDS
T05761
Name
(RefSeq) syntaxin-71
KO
K08506
syntaxin of plants SYP7
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
110614627
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mesc04131
]
110614627
Membrane trafficking [BR:
mesc04131
]
SNARE
SNAP-25[C] (Qc)
Syp7
110614627
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNARE
DUF5089
DUF7368
Peripla_BP_2
Ran-binding
Hydro_N_hd
Spc7
BST2
Motif
Other DBs
NCBI-GeneID:
110614627
NCBI-ProteinID:
XP_021611912
LinkDB
All DBs
Position
5:complement(2710979..2713573)
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AA seq
266 aa
AA seq
DB search
MTVIDLITRVEAICKKYEKYDVDKQKDLNVAGDDAFACLYAVVEADLDAALQKSESAATE
KNRATVIAMSAEIRRTKARLLEELPKLQRLAFKKVKGLSKEELEARSDLVSTLKERIEAI
PDGSTSTAKQASGWAPSTSHKGFKFDSTYDGGFDGEYFQQTEESDRFRQEYEMRRMKQDQ
GLEVIAEGLDTLKNMAHDMNEEMDRQDPLMDEIDDKVDRATSDIKSTNVRLRDTLNQLRS
SRNFCIDIILLCIILGIAAYLYNVLK
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgactgtgatcgacttgataaccagagttgaagctatttgcaagaaatatgaaaagtac
gatgttgataagcaaaaggaccttaacgtcgccggcgatgatgctttcgcctgcctctac
gctgtcgtcgaggctgaccttgatgctgctcttcaaaaatcggagtcggctgcaacggag
aagaatagggctacggttattgctatgagcgctgagattcggagaaccaaagctcgattg
ctcgaggaactccccaaattgcagaggctcgcttttaagaaggtgaaagggctctcaaaa
gaagagcttgaggctcgtagtgatttagtttccacactaaaagagaggattgaagcgatc
ccagatggaagtactagcactgctaaacaagccagtggctgggcaccttcaacctcacac
aaaggattcaaatttgactcaacttacgatggtggatttgatggtgaatatttccaacaa
actgaagagtcagaccggtttaggcaggaatacgaaatgcgtagaatgaaacaggatcaa
ggtttagaagtcatagcagaaggattagacacactgaaaaacatggcccatgacatgaat
gaggagatggacaggcaagacccactgatggatgaaatagatgacaaggtggacagggca
acctcagacatcaaaagtactaacgtgagacttagggataccctcaaccagctgaggtcc
agccgcaacttttgcattgacatcatccttctctgtataattttgggcatcgctgcttat
ctatacaacgtgttgaagtga
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