Manihot esculenta (cassava): 110615039
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Entry
110615039 CDS
T05761
Name
(RefSeq) rhamnogalacturonate lyase isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
110615039
Enzymes [BR:
mesc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
110615039
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
SpaA
Endotoxin_C
CarbopepD_reg_2
EMC7_beta-sandw
NOMO1-like_2nd
Ig_DR_A0283-like
Motif
Other DBs
NCBI-GeneID:
110615039
NCBI-ProteinID:
XP_021612438
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Position
5:31045049..31051406
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AA seq
705 aa
AA seq
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MGLRGYFMIFLFSVFFILSDNFPASLSSSHQQVHNSSSSGFHASRETPEAVVGEENPEAV
RLQFQDNYVVVDNGFMQLTISNPEGIVTGIQYNGISNLLEVLNDENDRGICLCRYWDLVW
SDETTTRKKGNFDRMEGTSFKVIQQNEKQIELSFTRTWNSSLHGKVVPLNIDKRFVVLGG
TSGFYTYAIYEHLKEWPAFDLDNTRIVFKLRNDKFHYMAIADDRQRYMPLPEDRREGRGQ
VLAYPEAVLLVNPVEPQFKGEVDDKYQYSCESRNNGVHGWICDDPAVGFWLITPSYEFRS
GGPLKQFLTSHVGPTTLSVLHSTHYLGADMIAKFVANEPWKKVYGPVFVYLNSLLDHGDP
LSLWQDAQKQMMNEVQRWPYDFLASQDFPPSDQRGKVSGRLLVKDRYVSDGNISADGAYV
GLASPGDAGSWQLEAKGYQFWTETDKDGQFTINNIRPGVYNLYAWVPGFIGDYKYETLIN
ISAGGNITVDDIVYEPPRNGSTLWEIGIPDRVASEFYIPDPNPKYVNKLYLNHTDRYRQY
GLWERYAELYPDGDLVFTIGTSNYTKDWFFQQVTRKINNSTYEGTTWQIKFKLDEIDQNW
TYTIRLALATANNANLQVKINDLNGNSSLLSTGVFGKDNTIARHGIHGLYRLFNISIPGA
QLLQGNNTIFLTQASGTSPFEGIMYDYIRFEGPPSSNTIKNTRFR
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgggtttgcgaggatactttatgatttttttattttctgtctttttcatcctctcagat
aacttccctgcttcattatcttcatctcaccagcaggttcacaattcaagttcatcaggc
tttcatgccagccgagaaactccagaggcggtggtcggcgaagaaaatccggaggctgtg
cgacttcaatttcaagataactatgtggtggtggataatgggttcatgcagctcacaatt
tcaaacccagaaggaatcgtcactggaatacagtacaacggaatcagcaatttgcttgaa
gttcttaacgatgaaaatgacagaggaatttgtttatgcagatactgggatctcgtatgg
agtgacgaaacaactactcggaaaaagggcaattttgacaggatggaaggaacaagtttt
aaggtaatacaacaaaatgagaaacaaatagaactctcattcacaagaacatggaattcc
tccctacatggaaaggtcgttccattgaacattgacaaaaggtttgtggtacttggtggt
acgtcaggcttctacacatacgccatttatgagcacttgaaggagtggcctgctttcgat
cttgataataccaggattgttttcaagcttagaaacgacaagtttcactatatggccata
gcggatgacaggcaaagatacatgccgttacctgaagaccggcgggagggcagaggccaa
gttctagcctatccagaggctgtcttgctcgttaatcctgttgaacctcaatttaaagga
gaggtagatgacaaatatcaatactcatgtgagagtaggaacaacggagttcacgggtgg
atctgcgatgaccctgccgtgggtttctggctaattactccaagttacgagtttaggtct
ggtgggcccctcaagcaatttcttacctctcatgtgggcccaacaactctttcggtattg
cacagcactcattatttgggagcagacatgatagcaaaatttgtagccaatgagccatgg
aagaaagtatatggccctgtttttgtctatcttaattcactgttggaccatggtgaccct
ctttccctttggcaggacgctcagaaacagatgatgaatgaagttcaacgctggccctac
gatttccttgcttcccaagattttccaccatcagatcaacggggtaaagtcagtggcagg
ctactagtcaaagataggtacgtcagcgatgggaacatttctgcggatggagcttacgtg
gggctggcatctcctggagatgctggctcctggcaattagaagctaagggttaccagttc
tggactgagacagacaaagacgggcagttcacaatcaataatataaggcctggtgtttac
aatctctatgcatgggttcctggattcatcggagattataaatatgaaactcttattaac
atatctgcaggtggtaatattactgttgatgatatcgtctatgagcctccaaggaatggc
tccacactgtgggaaataggaattcctgatcgtgttgcatcagaattctacattcctgat
ccaaatccaaaatatgtaaacaagctttacctcaatcacactgacaggtataggcagtat
ggattatgggaaagatatgcagaattatatcctgatggagacttggtcttcacaattggc
acaagtaattacacaaaagattggtttttccaacaagtaaccaggaagattaataacagc
acatatgaaggaactacatggcaaatcaagttcaagcttgatgaaattgatcagaattgg
acttacacaatacgattggcacttgcaacagcaaacaacgcaaatttgcaggtaaaaatt
aatgatcttaatgggaattcttctctgttatcaactggagtgtttggcaaggacaacaca
attgcaagacatggaattcatgggctttacaggctgtttaatattagcataccaggagct
cagctcctgcagggaaataacaccatttttttaacgcaagcaagcggtactagccctttc
gaggggatcatgtacgattacattcgttttgaaggccctccgtcttctaatactataaag
aataccagatttagatag
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