Manihot esculenta (cassava): 110615139
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Entry
110615139 CDS
T05761
Name
(RefSeq) nuclear transcription factor Y subunit B-5
KO
K08065
nuclear transcription Y subunit beta
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mesc03000
]
110615139
Transcription factors [BR:
mesc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Heteromeric CCAAT factors
110615139
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
CBFD_NFYB_HMF
Histone
Bromo_TP
CENP-T_C
TFIID_20kDa
DUF6000
Motif
Other DBs
NCBI-GeneID:
110615139
NCBI-ProteinID:
XP_021612553
LinkDB
All DBs
Position
5:complement(5425707..5426577)
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AA seq
161 aa
AA seq
DB search
MVDNIGNNSERSCQKYSFAGASSEDGIIKEQDRLLPIANVGRIMKQILPPSAKISKEAKE
TMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICWALATLGFDDYAEPLKRYLHRYREQ
EGERGSHRASNNIEEKDDYRGDQSMKSIASLNFPVNSRRFS
NT seq
486 nt
NT seq
+upstream
nt +downstream
nt
atggttgataacataggcaataattcagaaagatcatgccaaaagtatagctttgcagga
gccagtagtgaagatggcatcataaaggagcaagatagattgcttccaatagctaatgtc
gggaggatcatgaagcagattctacctccgagtgcgaaaatctccaaggaagctaaagaa
accatgcaagaatgcgtatcagagttcataagtttcgtcactggtgaagcatctgataaa
tgtcacaaagaaaagcgcaagacagtaaatggagatgatatttgttgggctctagcaact
ctagggtttgatgattatgctgagccactcaagaggtatttgcatagatacagggagcag
gaaggagagagaggcagccatagagcaagcaacaatattgaagaaaaagacgattataga
ggtgatcagtcgatgaaatctattgcttcattgaattttccagtgaattccaggcgattt
tcttga
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integrated database retrieval system
