Manihot esculenta (cassava): 110615169
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Entry
110615169 CDS
T05761
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc00040
Pentose and glucuronate interconversions
mesc01100
Metabolic pathways
Module
mesc_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110615169
Enzymes [BR:
mesc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
110615169
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
Beta_helix
Motif
Other DBs
NCBI-GeneID:
110615169
NCBI-ProteinID:
XP_021612587
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Position
5:20908710..20915296
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AA seq
394 aa
AA seq
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MASTVSFLAFTFFSIFLVSSSPAIAGSAQYSVQSYGAKPDGTTDSTKAFLAAWAQVCGSS
ETASLYVPSGRFSLGKVTFQGPCKNSAILVTIDGTLVAPSDYSAIGHEKNWLMFEHVDGL
TVSGGILDGQGTALWSCKASGKNCPSGATSIEFSNSNNIQINGLASQDSQKFHIVINGCN
NVKVQDVKVSAAGNSPNTDGIHVEQSNGVTILNSKIGTGDDCVSIGPGTTNLWIENVACG
PGHGISIGSLGKELEEDGVQNVTVKTCTFSGTENGVRIKSWGRPSTGFAKNILFQHAVMT
NVQNPIVIDQNYCPGDKNCPNQQSGIKISDVTYQDIHGSSATEVAVKLDCSKKNPCTGIE
LEDVKLTYNNRPAEASCTNAAGTISGFVQPSSCL
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atggcaagcacagttagctttcttgctttcacatttttctccattttcttagtttcatcg
tctcctgcaattgcaggatcagcacaatacagtgtacagagctatggtgccaagcccgat
ggcacaactgactcaaccaaggcctttcttgctgcatgggctcaggtctgtgggtcttcg
gaaactgcctctctttacgtgccttcagggaggttttctctaggcaaggtgacctttcag
ggcccctgcaagaacagtgccattctagtcactatcgatggtacccttgtggctccatca
gattactcggctattggtcatgaaaaaaattggctaatgttcgagcacgttgatgggctt
accgtttccggcggtatacttgatggtcaaggcactgcgttatggtcttgcaaagcctcc
ggcaagaattgccccagtggcgcaacgtcaatagaattctccaattccaataacatccaa
atcaatggattagcatcacaagatagtcagaagtttcacattgtcatcaacggctgcaac
aatgtgaaagtccaagatgtgaaagtctctgccgccggcaacagcccgaacaccgacggg
attcacgtcgaacaatcaaatggtgtcacaatcttgaattccaagattggtacaggtgat
gattgtgtatccattggccctggcaccactaatttatggattgaaaatgttgcttgtgga
cctggccatggaatcagcattggaagtttagggaaggaacttgaagaagatggagtgcaa
aatgtaacggttaagacttgtacattttctggcactgaaaatggtgtgaggattaaatct
tgggggagacccagcactggttttgctaagaacattcttttccaacatgctgttatgacc
aatgtccaaaacccaattgtgattgatcaaaattattgtcctggtgacaaaaattgtcct
aatcagcaatctggtattaaaattagcgatgtgacgtaccaagacatccatggatcatca
gcaacagaagtggcagtgaaattggactgtagcaagaagaatccatgcactgggattgaa
ttggaggatgtgaagctcacttacaataatcggccagctgaagcttcctgtactaatgct
gccggtacaatttctggctttgttcaaccctcaagctgtctgtag
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