Manihot esculenta (cassava): 110615213
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Entry
110615213 CDS
T05761
Name
(RefSeq) chloride channel protein CLC-f isoform X1
KO
K03281
chloride channel protein, CIC family
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mesc02000
]
110615213
Transporters [BR:
mesc02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
110615213
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
Motif
Other DBs
NCBI-GeneID:
110615213
NCBI-ProteinID:
XP_021612678
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Position
5:complement(33054543..33061900)
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AA seq
770 aa
AA seq
DB search
MGGGERGEYNDEKFMLISNSDRGEDGDGGEDLEDQGITSTPNSLSKGASGGAIKDLFLKH
LDRSFPARCLSSFKRLEKDTSRDLSPRPHSHSHNPNRNRDDFGGHHDDDVLGDSAPPEWV
LLLLGCLLGLASGLCVAAFNTGVHVIHEWAWSGTPNEGAAYLRLQRLADTWHRILLIPVT
GSVIVGMMHGLLEILDQIRQTSITSPSHRQGIDLVAGVFPTIKAIQAAVTLGTGCSLGPE
GPSVDIGKSCANGLLLMMENNREREIALVAAGAAAGIASGFNAAVAGCFFAIETVLRPRR
AENSPPFTTAMIILASVISSTVSNVVLGTQSAFTVPPYDLKSAAELPLYLILGMLCGVVS
VAFTRLVSWFTDAFEFIKEKFALPAVFCPALGGLGAGIIALRYPGILYWGFTNVEEILRT
GKSASAPGIWLLTQLAVAKVVATSLCKGSGLVGGLYAPSLMIGAAVGAVFGGSAAEIINS
AIPGNAAVAQPQAYALVGMAATLASVCSVPLTSVLLLFELTKDYRIILPLMGAVGLAIWV
PSVANQTKDTEASNKRALTRGYSSLSNSEDINEVWRRTDGGGDLELSVVENASDYEAITQ
DLLLEDLKVSRAMSKNYVKVSMSSTLKEAIDCMHNSKQNCVLVVDDEDLLDGILTYGDIR
QLSNKSDEDAIGDSTITDVNTCLVSSICTRGISYRGQDRGLLTCYPDTDLAIAKELMEAK
GVKQLPVVKRCRGSWKERKRRIVAVLHYDSIWSCLREEIARIEKKVVLTR
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgggaggaggagaaagaggagaatacaacgatgaaaaatttatgttgatatcaaatagt
gacagaggagaagacggcgatggtggcgaggacttggaagatcaaggcatcaccagtacg
cctaatagtctcagcaaaggagcaagcggcggtgctattaaggatctcttcctcaaacac
ttggatcgaagctttcccgctcgctgcctctccagttttaagcgtctggagaaggatact
agtagagatttgtccccgcgtcctcattctcattctcataatcccaatcgtaatcgtgac
gattttggtggacatcatgatgatgatgttctcggggatagcgcacctcccgagtgggtt
ttgcttcttcttggttgccttcttggcctcgcctctggtctctgtgtcgctgcttttaat
acaggggttcatgttatacatgaatgggcttggtctgggactcctaatgagggtgctgca
tatcttcgtctgcagaggttggctgacacttggcatcgaattcttttgattccagtcaca
gggagtgttattgttgggatgatgcatggcttactggagatattagaccaaataagacag
actagtattaccagtccttcccacagacaaggtattgatttggttgctggagttttcccc
acgataaaggccattcaagctgctgtgactctaggtactggttgttctttgggtcctgaa
ggccctagtgtcgatattggaaaatcgtgtgccaatggacttttgttaatgatggaaaac
aacagagaaagggagatagctcttgttgcagctggtgcggcagctgggattgcttcaggt
tttaatgcagctgttgctggttgtttctttgctattgaaactgtgttaaggccacgacgt
gctgaaaattctcctccatttacaactgcaatgataatattggcttctgttatatcatca
actgtttcaaatgtcgtacttggtacacaatcagctttcacagtgccaccatatgatttg
aaatctgctgctgaactacctttgtacctgatcttgggcatgctctgtggtgttgtaagt
gtggcgtttactcgcttggtctcttggttcaccgatgcatttgagttcatcaaggaaaaa
tttgcgctccctgctgttttttgtcctgctttaggcggtttaggagctgggataattgct
ctcaggtatcctgggatactatactggggtttcacaaatgttgaagaaattttacgtact
gggaaaagtgcttcagctccaggaatctggctgttaacccaactagcagtagccaaagtc
gtggctacatctctgtgtaagggttcaggtcttgtaggtggcctttatgcaccaagtttg
atgattggtgctgctgttggtgctgtatttgggggttcagctgctgaaattatcaattca
gccattcctggaaacgctgctgttgctcagccgcaagcatatgcattagttggaatggct
gctacattagcttcagtttgttcagtgccattgacatcagttctcctgctgtttgagttg
acaaaagactacaggataatccttcccctcatgggagctgttggattagcaatatgggtt
ccttctgtggccaaccagacgaaagatactgaagcatctaataaacgagctttgacaagg
ggttattcttctctctcaaattctgaagacataaatgaagtctggagaagaactgacggt
ggaggtgatctagaactctctgttgtagagaatgcttctgattatgaagcaatcactcaa
gatttgcttttggaagatctgaaggtttctagggccatgtcaaagaactatgtaaaggtt
tcaatgtcctcaacactgaaagaagctattgattgtatgcataacagcaagcagaattgt
gtacttgtggttgatgatgaagatttactggacggaattctaacatatggtgacattaga
cagttgtctaataagtctgatgaagatgctataggtgattcaacaattacagacgtaaat
acctgtcttgtttcatccatatgtacccgagggataagctacagaggtcaagatcgcggg
cttttgacctgctatccagacactgatttggcaattgccaaggagctaatggaggccaaa
ggggtcaagcagttgcctgttgttaagcggtgtagaggctcctggaaagaaaggaagcga
agaattgttgctgtccttcattacgattcaatttggagttgtctcagagaggagatagct
cgtatagaaaagaaagtagtcttgacacgataa
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