Manihot esculenta (cassava): 110615247
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Entry
110615247 CDS
T05761
Name
(RefSeq) methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial isoform X1
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc00280
Valine, leucine and isoleucine degradation
mesc01100
Metabolic pathways
Module
mesc_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
110615247
Enzymes [BR:
mesc01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
110615247
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Gene cluster
GFIT
Motif
Pfam:
MCCA_BT
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
Biotin_lipoyl_2
ATP-grasp
HlyD_3
RnfC_N
HlyD_D23
ATPgrasp_ST
ATP-grasp_3
NQRA_N
Motif
Other DBs
NCBI-GeneID:
110615247
NCBI-ProteinID:
XP_021612728
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Position
5:6394028..6404145
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AA seq
744 aa
AA seq
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MASMASVLRRKLNLKPFLIQVRFLSVSSHAFETTQRIEKILVANRGEIACRIMRTANRLG
IRTVAVYSDADRDSLHVKSADEAVHIGPPPARLSYLSGPSIVEAAIRTGAQAIHPGYGFL
SESADFAKLCEDTGLTFIGPPASAIRDMGDKSASKRIMGAAGVPLVPGYHGDEQDIELMK
SEADKIGYPILIKPTHGGGGKGMRIVQSPNQFVDSFLGAQREAAASFGVNTILLEKYITH
PRHIEVQIFGDKYGNVLHLYERDCSIQRRHQKIIEEAPAPNVMNDFRSHLGQAAVSAAKA
VGYHNAGTVEFIVDKVSGQFYFMEMNTRLQVEHPVTEMIVGQDLVEWQIRVANGEPLPLS
QSQVPLLGHAFETRIYAENVPKGFLPATGFLHHYRPVAVSSAVRVETGVEEGDTVSMHYD
PMIAKLVVWGENRAAALSKLKDCLSKFQVAGVPTNINFLQKLANHRAFEDGDVETHFIEN
HKDDLFIDPNNSLLAKEAYSSARFSAGLAAACLCEKEHSFLKEGYGGSSLHPIWYSHPPF
RVHHLARHTMVLEWDNEFDGSGSNHLTMMISVIYQPNGNYLIETGEIGSPGLEIKAMHMH
DHDFRVETDGLSMSISLAAYSKDETQHIHIWHGTHHHHFRQKLGIDLCDDEETQHKTNFE
TASHPPGTVVAPMAGLVVKVLVKDESKVEEGQPILVLEAMKMEHVVKAPFAGYVHGLQVT
AGQQVSDSSLLFIIKENHPILCIP
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgatggcttcagtcctccgtcgaaaactcaacctcaagcccttcctcatccaa
gtaagattcctctccgtatcttctcatgcctttgaaacgacacagcgcatagagaaaata
ttggttgcgaaccggggtgaaattgcttgtaggatcatgaggacagccaaccggctaggg
attcgaactgttgccgtttacagcgacgctgacagagactctcttcatgttaaatcagct
gacgaggcggttcatataggtccacctccggcaaggctgagttatttgagtggtccttca
attgttgaggctgccattcgtactggtgctcaggctatccatccaggatatggtttctta
tctgagagtgcagattttgctaaactttgtgaagatacgggtcttacatttattggtcct
cctgcttcagcaattcgggacatgggagataaaagtgcatccaagaggataatgggtgct
gcaggggtgccacttgtcccaggatatcatggcgatgagcaagatattgaactcatgaag
tcagaagcagataaaattggatacccgatcttgataaagccaactcatggaggtggagga
aagggtatgaggattgtacaaagcccaaatcaattcgttgactctttcttgggagcacaa
cgtgaggctgcagcctcttttggtgtaaacacaattttgctagagaaatacatcacacat
ccaagacatatagaagtccagatttttggagacaaatatggaaatgtactacatttatat
gaaagggattgcagcatacagagaagacatcagaagataattgaagaagctccagctcca
aatgttatgaatgacttccgctcccacttgggtcaggctgcagtatctgcagcaaaggct
gttggttaccacaatgctgggactgtggagtttatagttgacaaagtctccggccaattt
tattttatggagatgaacacacgtcttcaggttgagcatcctgtgacagagatgattgtt
ggtcaagatcttgtagaatggcaaattcgggttgcaaatggagaaccacttccccttagt
caatcacaggtgccattgttgggtcatgcatttgaaactcgaatatatgctgaaaatgtt
cctaaaggatttcttccggcaactggatttcttcatcattatcgccctgttgcagtctcg
tcagcagttcgcgttgagactggagttgaagagggggacactgttagcatgcactatgat
cctatgattgcaaagcttgtagtctggggagaaaaccgtgctgcagcattgagcaaactg
aaggattgcttatcaaaatttcaggtcgcaggagtgccaactaatatcaattttctccaa
aaacttgctaaccatagagcttttgaagatggcgacgtggaaacccactttattgagaac
cataaagatgatctcttcattgatcctaataattcattgttagccaaagaggcatatagt
agtgcaagattcagcgcaggtctggcagctgcatgtctttgtgaaaaagaacactctttt
ttgaaggaaggttatggaggaagcagcttgcaccccatatggtattctcatcctcctttc
agagtccaccatcttgctaggcatactatggtattggagtgggacaatgaatttgatggc
agtggctcaaatcatctgacaatgatgatttctgtaatttaccagccaaatgggaactat
ctgattgagactggagaaattggttcccctggtttagaaatcaaggcaatgcacatgcat
gaccatgatttcagggttgagactgatggtttaagcatgagtattagtttggctgcttat
tcaaaggatgagacacagcacattcatatatggcatggaacacaccaccaccattttaga
caaaaattggggattgatttatgtgatgatgaagaaacccaacacaagaccaattttgag
actgcatctcacccccctggaactgtggtggctcccatggctggtttagtggttaaggtc
cttgtgaaggatgaatcaaaagtggaggaagggcaacctatattggtgttagaagcaatg
aaaatggagcacgttgtgaaggcgccatttgcggggtatgttcatgggcttcaagtgaca
gctggccaacaagtttcagatagcagtcttctcttcattattaaggagaatcatccaata
ttatgcattccttga
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