Manihot esculenta (cassava): 110615296
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Entry
110615296 CDS
T05761
Name
(RefSeq) small nuclear ribonucleoprotein Sm D2 isoform X1
KO
K11096
small nuclear ribonucleoprotein D2
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110615296
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mesc03041
]
110615296
03032 DNA replication proteins [BR:
mesc03032
]
110615296
Spliceosome [BR:
mesc03041
]
Complex A
U1 snRNP components
Sm proteins
110615296
U2 snRNP components
110615296
Complex B
U1 snRNP components
110615296
U4/U6.U5 tri-snRNP components
110615296
Complex C
U2 snRNP components
110615296
DNA replication proteins [BR:
mesc03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
110615296
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
110615296
NCBI-ProteinID:
XP_021612793
LinkDB
All DBs
Position
5:5197099..5200319
Genome browser
AA seq
108 aa
AA seq
DB search
MSRPMDEDATDKNESEDFSTGPLSVLLMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMV
LENVREMWTEVPKTGKGKKKAQPVNKDRFISKMFLRGDSVIIVLRNPK
NT seq
327 nt
NT seq
+upstream
nt +downstream
nt
atgagtagaccaatggatgaggacgctacagacaagaatgagtcagaggatttcagcact
gggccactttctgttctcttgatgagtgttaaaaataacacacaggtgctcattaactgc
cgcaacaacaagaagcttcttggacgtgtgagggcatttgacagacactgcaacatggtt
ctagaaaatgtcagggagatgtggactgaggtgccaaaaactggaaaaggcaagaagaaa
gctcaaccagtcaacaaagataggttcatcagtaaaatgttccttcgaggggactctgtt
atcattgttcttaggaatccaaagtga
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integrated database retrieval system
