Manihot esculenta (cassava): 110615311
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Entry
110615311 CDS
T05761
Name
(RefSeq) peroxisome biogenesis protein 6 isoform X1
KO
K13339
peroxin-6 [EC:3.6.4.-]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
110615311
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mesc04131
]
110615311
Membrane trafficking [BR:
mesc04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
110615311
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_16
AAA_5
Rad17
AAA_22
RuvB_N
AAA_lid_3
TsaE
RNA_helicase
nSTAND3
AAA_28
DUF815
AAA_7
AAA_14
AAA_18
AAA_17
TIP49
NPHP3_N
Parvo_NS1
AAA_33
Cytidylate_kin
nSTAND_NTPase5
Mg_chelatase
ATPase_2
AAA_24
AAA_6
AAA_25
ATPase
IstB_IS21
PEX6_4th
AAA_2
Vps4_C
PhoH
Zn_ribbon_Com
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
110615311
NCBI-ProteinID:
XP_021612821
LinkDB
All DBs
Position
5:complement(5513784..5521143)
Genome browser
AA seq
937 aa
AA seq
DB search
MVQRRRKPLVLSSTKLLVDSVLSLSTLCEGDQVAGDDVSPSLQLRAGILRFSKSSVSDSK
LTSLDDSALVGLSTAVLKRLAVTSGSLVLIKNIETNAHRIAQVVILDPPRTHGHASGDKG
PVSHPPNTMIVFPSFRLPSDDIPLLDQDIAYLSPLLAFNLDLHVSCLKSLVHQGNETLAS
LFYAKMDNETTTEVGDGSLITLGLEPLAQLPRYASHLRVSFIKIPECGTLESLKGSSSVE
AEERQELIDLALHNYFKADRYLARGDIFNICINWNCNSVICIPCSQRSQNRSDNVIYFKV
VAMEPSDEIILRVNHTQTALVLGGTVPSALPPDLLIGETKGFPPFQGDTVKTLASILSPP
LCPSALSSKFRISVLLYGPAGCGKRTVVRHISRRLGLHVVEFSCHNLMSSSDRNTSVALA
QAFNTAQRYSPTILLLRHFDVFRNLNSQDGSSNDQVGLTSEVASVIREFTEPDVEDGDKY
SNGKLNGDPPVKDAGKISRHQLLLVATAESSEGLPPTVRRCFSHEISMGPPTEEQRVEML
SQLLQSGSELLSSSGLEDAVKDIVGQTSGFMPRDLRALAADAGANLISKCNTQVDEAKLE
EMGSSLGVKVVQDDETCNDIPNVMGKEYLPRALERSKKRNASALGTPKVPNVKWEDVGGL
EEVKKSILDTVQLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVK
GPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQM
LAEIDGLNDSTQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDASYRERVLKALTR
KFTLHQDISLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLSSESDSSSQVHQPDSVV
VEYDDFVKVLAELSPSLSMAELRKYEMLRDQFEGAPR
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atggtccagagaaggagaaaacctctggttctctcttcaaccaaattacttgttgattct
gtactcagcttgtccactctttgcgaaggggaccaagtcgctggagatgatgtctcgccg
agtttacagttacgagcgggaattctccggttctccaagtccagcgtttcagattctaaa
ctaacttctcttgacgactctgctttggttgggctctccactgctgttctcaagcgatta
gctgtaacttctggttcgctggtgcttatcaagaatattgaaacaaatgcacacaggatt
gcccaggttgtaattctagatcccccaagaactcatggacatgcatctggtgataaagga
ccagtttcccatcctccgaacacaatgatcgtttttccttcatttagactgccttcagac
gacattccattattagaccaggatattgcatatctctctcctctattagcgtttaacctt
gacttgcatgtatcttgtttgaaatcacttgttcaccaagggaatgagaccttagcatct
cttttttatgctaaaatggacaatgagactactacagaagttggtgatggttctttaatc
actttaggattggaacccttggctcaactgccaaggtacgcctcacacttaagagtttct
tttatcaagataccagaatgtggtacactggaatctttgaaaggaagttcatcagttgaa
gctgaagaacgccaagaattgattgatttggcattacacaactattttaaagctgataga
tacctagcaagaggtgatattttcaacatctgcataaattggaattgcaattcggttatt
tgcattccttgcagccaaaggtcacaaaatagaagtgataacgttatctacttcaaggta
gttgctatggagccatctgatgaaatcattcttcgagtaaaccacactcaaacagcccta
gttcttggagggactgttccttctgctcttcccccagatctgctgattggtgaaaccaaa
ggttttccccctttccagggggacacagtaaaaactttggcctccattctttcaccacca
ttgtgcccatcggcgctttcttcaaaattcagaatttctgtgctactatatggtccagca
ggctgtggaaagagaactgtagttagacacatttctcgtcgcttgggccttcatgttgtg
gaattcagctgtcataatcttatgtcatcctctgacagaaatacatctgttgcattagct
caggctttcaacactgctcaaagatattcacctacaattcttcttctgcgtcattttgat
gtcttccgaaatttgaactcacaagatggttcatcaaatgatcaagttggtcttacctca
gaagttgcatcagttattagggaattcactgaaccagatgttgaagatggtgacaagtac
tccaatggaaaattaaatggtgatcctccagtcaaggatgctggaaaaataagtaggcat
cagttactgttagtcgcaactgctgagagttctgagggtctacctccaactgtaaggcgt
tgcttcagccatgaaataagcatgggtcctcccactgaggaacagagggttgaaatgttg
tctcagttactgcaaagtggttcagagctcctctcaagtagtgggttggaggatgcagtg
aaggacatagtgggacagacatctggtttcatgccacgcgatttgcgtgctttagctgct
gatgctggtgcgaatttaatctcaaagtgcaatactcaagttgatgaagctaagctcgag
gaaatgggtagttctcttggagtcaaagtagtgcaggacgatgaaacatgcaatgatatt
cctaatgttatggggaaagaatatttgccgagagccttggaacgctctaagaagaggaat
gcatcagcactaggtactccaaaggttcctaatgtgaagtgggaagatgttggtggacta
gaggaggtgaagaaatcaattttggatactgttcagttacctctcctgcataaggattta
ttttcatctggcttgcgtaagcgctctggtgttctgctgtatggtcctccggggacagga
aagactttactggcaaaagctgtagcaacagaatgttccttaaattttctaagtgtaaaa
gggcctgaattgatcaacatgtacataggagagtcggagaaaaatgtccgtgacattttc
cagaaggcaaggtcagcacgcccctgtgtaatattctttgacgaacttgattctcttgca
ccagctcgtggtgcctcaggagattctggtggtgtaatggatagagtagtttctcagatg
ctcgcagagattgatggcctaaatgattccacacaagacctctttatcataggagcaagc
aacagaccagatctaattgatccagcacttcttcggccaggccgatttgataagctgcta
tatgttggagttaactctgatgcatcttacagggagcgggtccttaaggcgcttactcgt
aagttcacattgcaccaagatatctctctttactcgatagcaaagaaatgccctccaaac
ttcactggtgcagacatgtatgctttatgtgcagatgcctggtttcatgctgcaaagcgc
aaggttttgagttcagaatcagattcttcttcccaggtccatcaacctgattcggtggtc
gttgaatatgatgactttgtaaaggtcttggctgagctgtctccttccctctccatggca
gagcttaggaaatatgagatgttgcgagatcagtttgaaggagcaccaagataa
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