Manihot esculenta (cassava): 110615487
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Entry
110615487 CDS
T05761
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1
KO
K14485
transport inhibitor response 1
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
110615487
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mesc04121
]
110615487
Ubiquitin system [BR:
mesc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
110615487
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box-like
F-box
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
110615487
NCBI-ProteinID:
XP_021613033
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Position
5:complement(5611390..5619296)
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AA seq
584 aa
AA seq
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MLRMASSFPEEVLEHVFSFIHSDKDRNAISLVCKSWYEVERWCRRRIFVGNCYAVSPPMV
IRRFPELRSVELKGKPHFADFNLVPDGWGGYVFPWIEAMANAYPWLEEIRLKRMVVTDET
LELIAKSFKNFKVLVLSSCEGFSTDGLAAIAANCRNLKELDLRESEVDDPSGHWLSHFPD
SFASLVSLNISCLGSEVSFSALERLVGRCPNLSTLRLNRAVPLDKLANILRRAPQLVELG
TGAYSAELRPDVFSSLAGAFSGCKELRSLSGFWDAVPGYLPAIYPICSSVTSLNLSYATV
QSPDLIKLVSQCQSLQRLWVLDYIEDVGLEALASFCKDLRELRVFPSDPFALEPNVSLTE
QGLVSVSAGCPKLHSVLYFCRQMTNDALVTIAKNRPNMTRFRLCIIEPRTPDYITLQPLD
DGFGAIVEHCKDLQRLSLSGLLTDHVFEYIGTHAKKLEMLSVAFAGDSDLGLHHVLSGCE
NLRKLEIRDCPFGDKALLVNAAKLETMRSLWMSSCSVSFGACKLLGQKMPRLNVEVIDER
GPPDSRPESCPVEKLYIYRTIAGPRFDMPGFVWTMDEDSALRLS
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgttgagaatggcgagctccttcccggaggaggtgctggagcacgttttctccttcatt
cacagtgataaggaccggaacgcaatatcgttggtatgcaagtcctggtacgaggtagag
aggtggtgccggaggaggattttcgtcgggaactgttacgccgtcagtccgccaatggtg
attaggagatttccggagctgagatcggttgagctcaaagggaagccgcacttcgcggac
ttcaatctcgtcccggacggttggggtggttatgttttcccgtggatcgaggccatggct
aacgcatacccttggctggaggagatcaggttgaagagaatggtggttacggatgagact
ttggagctgattgctaagtcctttaagaatttcaaggtcttggtgctttcatcatgtgag
ggtttctctactgatggacttgccgccattgctgctaattgcaggaatctgaaggagctg
gatttgcgggagagtgaggtggatgatcctagtgggcattggttgagccacttccctgac
tctttcgcatcactagtgtctcttaatatttcctgcttagggtctgaggtgagtttctca
gccctggagcgcctggtgggtcggtgccccaatttgagtactctacggctcaatcgtgct
gtacccctcgacaagcttgctaatatccttcgcagggcgccccagctggttgagttgggc
acgggtgcttactcagctgagctgcggccggatgtcttctcaagcctagccggggctttt
tctgggtgcaaggaactgagaagtttatctggattttgggatgcggtcccaggttatctt
ccagcaatttatcctatctgctctagcgtaacatcattgaacttgagctatgccactgtc
caaagccctgatcttattaagcttgttagtcagtgtcaaagtttgcagcgcctatgggtt
ctagattacattgaggatgttggacttgaagctcttgcatcattttgcaaggacctgcga
gaattgagggtattcccatctgatccatttgccttggaaccaaatgtatccttgacagaa
cagggccttgtctctgtttctgctggctgccctaagctccactctgttttgtacttttgc
cgtcaaatgactaatgatgcattggtaacaattgccaagaaccgtcctaacatgactcgc
tttcgtctttgtattattgaaccaagaacccctgattacataacccttcagccgttagat
gatggttttggagctattgttgaacactgcaaggacctccagcgcctttccttgtcaggt
cttctcactgatcatgtgtttgagtatattggaacccatgccaaaaagctagagatgcta
tctgtagcttttgctggagatagtgatctgggactccatcatgtactgtctgggtgtgaa
aaccttcgcaaactagagattcgagattgcccctttggggacaaggctcttttggtcaat
gctgcaaagctggagacaatgcgatccctttggatgtcttcttgctcagtgagttttgga
gcatgtaagctgctaggtcagaagatgcctaggcttaatgttgaagttattgatgagagg
ggacctccagattcaaggccagaaagttgtcctgttgagaagctttacatttataggact
attgctgggcctcgattcgacatgcctggttttgtttggacgatggatgaagattctgca
ttgaggctttcttga
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