Manihot esculenta (cassava): 110615494
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Entry
110615494 CDS
T05761
Name
(RefSeq) glycine--tRNA ligase, chloroplastic/mitochondrial 2
KO
K14164
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
110615494
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mesc03016
]
110615494
Enzymes [BR:
mesc01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
110615494
Transfer RNA biogenesis [BR:
mesc03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
110615494
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Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_synt_2f
tRNA-synt_2e
DALR_1
RecX_HTH1
Motif
Other DBs
NCBI-GeneID:
110615494
NCBI-ProteinID:
XP_021613043
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All DBs
Position
5:4610863..4633922
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AA seq
1068 aa
AA seq
DB search
MTILALPLVISFLKPQAARLSLFRSSARPKPSCLGFNHRHFTRTSVSAISTSAAPQHSST
DPNNEPLKASVPTFQQAIQRLQEYWASVGCAVMQCSNTEVGAGTMNPLTFLRVLGPEPWN
VAYVEPSIRPDDSRYGENPNRLQRHTQFQVILKPDPGNAQDLFIRSLSALGIDVSEHDIR
FVEDNWESPVLGAWGLGWEIWMDGMEITQFTYFQQAGSLQLAPISVEITYGLERILMLLQ
GVDHFKKIQYASGITYGELFLENEKEMSAYYLEHASVHHLQKHFDFFEEEARSLLASGLA
IPAYDQLLKTSHAFNILDSRGFVGVTERARYFGRMRSLARQCAQLWLKTRESLGHPLGTV
SENIHLAFAKDVLEAAVKKVHGNSRSFVLEIGIEEMPPQDVVHASHQLKDLVLQLLEKQR
LGHGEVQAFGTPRRLVVYIKGLSTRQAENEVEVRGPPVLKAFDEQGNPTKAAEGFCRRNN
VSVDLLFRKVDGKTEYIYVRVTETARLALEILSEDLPVTISKISFPKSMRWNSQVMFSRP
IRWIMALHGDVVVPFNFAGVLSGNLSYGLRNTPSATVQVESADSYENIMQNAGICIDIEE
RKRRILEHSMALSTSINGHVLIQESLLNEVVNLVEAPVPVLGKFKESFLELPEDLLTMVM
QKHQKYFAVVDDSGKLLPYFIAVANGAINERVVRKGNEAVLRARYEDAKFFYEMDTRKKL
SEFRNQLKGILFHEKLGTMLDKMIRIENMVTKLSLQLGIREDMLQIVQDAASLAMSDLAT
AVVTEFTSLSGIMARHYALRDGYSEQIAEALLEITLPRFSGDILPKSEVGISLAVADRLD
SLIGLFAAGCQPSSTNDPFGLRRISYGLVQILVEQDKNLDLVQALRLAADVQPFKVDASM
IDDAYLFVTRRLEQYLVDKGISPEIVRSVLAERAAFPCLAAKTAYKMEALSKGNIFPKVV
EAYSRPTRIVRGKDVESDMEVDESAFETSEERALWSIFLSTKSKIHPGIEVDDFVEISSE
LLQPLEDFFNNVFVMVEDERIRKNRLALLKKIADLPRGIADLSVLPGF
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgacaatcctcgcgctccctttagtcatctcctttctaaaacctcaagctgctcgccta
tctttgttccgttcatctgctagaccaaaacctagctgcctcggcttcaatcaccgccac
tttactagaacctctgtctccgcaatcagtacctctgcagctccacaacattcgtcaact
gaccccaacaatgagcccctaaaagcctctgtccctacgtttcaacaagctattcagcga
ctccaggaatattgggcttcggttggatgtgcggtaatgcaatgcagcaacacggaggtt
ggagctgggactatgaatcctctgaccttcttaagggttcttggtccagaaccatggaat
gtggcgtatgtggagcctagtattcgtccagatgatagtcgttatggggaaaacccaaac
cgccttcagcgccatactcaatttcaggttatactaaaacctgatcctggaaacgctcaa
gacctctttattcgcagcttatcagctttaggtattgatgttagtgaacatgacatacga
tttgtggaggataattgggagagcccagtacttggtgcatggggtttgggttgggaaatc
tggatggatgggatggagatcactcagttcacctactttcagcaggctggaagtcttcaa
ttggcaccaatatctgttgagatcacttatggccttgagcggatactcatgttgcttcag
ggagttgatcattttaagaaaattcaatatgccagtggaattacttatggggagttgttc
ttagaaaatgagaaggaaatgagtgcatattatttagaacatgctagcgttcatcatctt
caaaagcactttgattttttcgaggaagaagctcgttccttgcttgcttcaggacttgca
atccctgcgtatgatcagcttctgaagacatctcatgctttcaatatcttggattctaga
ggttttgttggggtaactgagcgtgctcgttattttggtcggatgcgtagtttagctcga
caatgtgcccaactttggttaaagaccagggagtcccttggacatccacttggtactgtt
tctgaaaacattcatcttgcatttgctaaggatgttctagaggcagcagtcaagaaggtc
catggcaactcaaggtcatttgtccttgaaattgggattgaagagatgcctccacaagat
gtagttcatgcaagccaccaacttaaagatttagtgctacaattactagaaaaacaaaga
ttgggccatggtgaagtgcaagcttttggcactcctcgccgattagtggtttatattaag
ggtctttccactaggcaagcagagaatgaggttgaagttcgaggtcctcctgttttgaag
gcatttgatgagcaaggaaatcctacaaaggctgctgagggtttttgccgaagaaacaat
gtgtcagtggacttgttgtttagaaaggttgatggaaaaacagaatatatttatgtccga
gtaacagaaactgcccgacttgctttggagattctctctgaagatttgccagttaccatc
agtaaaatatcattcccaaaatcaatgcgctggaactctcaggtcatgttcagcaggcca
attcgttggattatggccttgcacggagatgtagttgttccatttaattttgctggagtt
ttgagtggcaacctatcttatggccttcgtaatactccttcagctaccgttcaggttgaa
agtgcagactcttatgaaaatataatgcagaatgcgggtatttgtattgacattgaggaa
cgaaagagaagaatcttggagcactccatggcactatcaacaagtatcaatggacatgtc
cttattcaggaaagcttacttaatgaggttgtaaatcttgttgaggcacctgtccctgtt
ctggggaagtttaaagagtccttcttagagcttccagaagatcttctaacaatggttatg
cagaagcaccaaaagtattttgctgtagttgatgatagtggaaagcttctgccttacttc
attgctgtggcaaatggggccattaatgagagggtggtaagaaaagggaatgaagctgtg
ctcagagctcgttatgaagatgcaaaatttttttatgagatggatacccggaagaagctt
tcggagttcaggaatcaacttaaagggattctttttcatgagaagcttggaacaatgctt
gacaagatgatccgcattgaaaacatggtcaccaaactaagtttacagttggggatcagg
gaggatatgcttcagattgtccaggatgcagcatcgcttgctatgtcagatcttgctacg
gcagttgtaacagaattcacttccctttctggaataatggcacgccattatgctcttagg
gatggctactcagagcagatagcagaggccttgttagaaatcacacttcctagattttct
ggagatatacttccaaaatctgaagtcgggatatctttggcagttgctgacagattggac
agccttattggcttatttgctgctggttgtcagcctagttccactaatgatccatttggc
ctgagaagaatttcttatggcctagtacaaatattggtggagcaggataaaaatttggac
ttggtccaggctttaagacttgcagctgatgtccaaccttttaaagttgatgcctccatg
atagatgatgcatatctgtttgttactcggagactagagcaatatctggtggacaaggga
ataagtccagaaattgttcgatctgttcttgcagagcgtgcggcttttccttgtctagca
gcaaagacagcatataaaatggaagccttgtcaaaaggcaatattttccccaaagtagtt
gaagcttattctcgtcctacaagaattgtccgtggaaaggatgtggaatctgatatggag
gtggatgagtctgcgttcgagacatcggaggagagagctttatggagcatcttcctgtcc
acaaaaagcaaaattcatcctggcattgaggtagatgattttgttgaaatatcttcggaa
ctgttgcaaccactcgaggatttcttcaataatgtctttgtcatggtggaggatgaaaga
attaggaagaacaggcttgccttgctgaagaaaattgcagatctgccaagaggtatagca
gacctctcagttttgcccggattttag
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