Manihot esculenta (cassava): 110615615
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Entry
110615615 CDS
T05761
Name
(RefSeq) RGG repeats nuclear RNA binding protein A
KO
K13199
plasminogen activator inhibitor 1 RNA-binding protein
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mesc03041
]
110615615
Spliceosome [BR:
mesc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
110615615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HABP4_PAI-RBP1
Stm1_N
Motif
Other DBs
NCBI-GeneID:
110615615
NCBI-ProteinID:
XP_021613280
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All DBs
Position
5:4635399..4639503
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AA seq
372 aa
AA seq
DB search
MATMNPFDLLGDDDAEDPSQLIAARQVAPAAAPKKSQTQSQSKQPVQSDSQAKQSAKLPS
KPLPPAQAVREAKNEAGRGGGRGGGRGYGRGRGGYNRDTNNENSFGSTGGPAAQGAPEDG
EAAKSSERRGYGGPRGGYRGGGRRGGFTNGEVGDGDRTRRQFERHSGTGRRNEIKRDGSG
RGNWGTQADELAQVTEEVVSEGEKNLGDKKPVGEEEIADAKKEGASIEPEEKEPEDKEPE
DKEMTLEEYEKVLEEKRKALQALKAEERKVDAKVFESMQQISSKKGNHEIFIKLGSEKDK
RKDAYEKDEKAKKSVSINEFLKPTEGERYYSPSGRGRGRGRGARGFSNRDAMSNVVAPSI
EDRGQFPTLGGK
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccatgaaccctttcgatttgttgggtgacgatgatgccgaggacccttcgcag
ctgattgcagctcggcaggtcgctcctgccgccgcccctaagaaatctcagactcaatct
caatccaagcaacctgtccagtctgactctcaagccaagcagtctgctaagctcccctct
aaacctctacctccggctcaggctgtgagggaggcaaagaatgaagctggccgtggagga
ggtcgtggtggaggacgtggatatgggcgtggccgtggtggctacaatcgggacaccaac
aatgagaattcattcggcagtactggaggacctgctgctcaaggtgctcctgaagatgga
gaagctgccaagtcctctgaaaggcggggatatggtggacctcgtggtggttaccgtggc
ggtggtcgccgtggtggtttcactaatggtgaagttggtgatggcgatcgcactcgtcgg
caattcgaacgtcatagtgggactggacgcagaaatgagatcaaacgagatggatctggt
cgtgggaactggggaactcaggctgatgaacttgctcaggtgaccgaggaagttgtcagt
gagggcgagaagaacttgggtgataagaagcctgttggagaggaggagatagcagatgca
aaaaaggagggagcttctattgaacctgaagaaaaggaaccagaagataaagaaccagaa
gataaggaaatgactcttgaagagtatgagaaggtgctggaagaaaagaggaaggccctg
caggcactcaaggctgaggaaagaaaggtggatgctaaggtgtttgagtccatgcagcag
atttcaagcaagaaggggaatcatgaaatctttattaaattgggctctgaaaaggataag
cggaaagatgcttatgagaaggatgagaaagctaaaaagtctgtcagcatcaatgagttc
ttgaagcctactgaaggggaaaggtattacagcccaagtggtcgtggtcgaggacgtggc
cgaggtgccagagggttcagcaacagagatgcaatgagcaatgtggtagccccctccata
gaagatcgtgggcagttcccaactttgggtggcaagtga
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