Manihot esculenta (cassava): 110615651
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Entry
110615651 CDS
T05761
Name
(RefSeq) AMSH-like ubiquitin thioesterase 1
KO
K11866
STAM-binding protein [EC:
3.4.19.12
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
110615651
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mesc01002
]
110615651
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mesc04131
]
110615651
04121 Ubiquitin system [BR:
mesc04121
]
110615651
Enzymes [BR:
mesc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
110615651
Peptidases and inhibitors [BR:
mesc01002
]
Metallo peptidases
Family M67
110615651
Membrane trafficking [BR:
mesc04131
]
Endosome - Lysosome transport
Others
Others
110615651
Ubiquitin system [BR:
mesc04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
110615651
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JAB
USP8_dimer
Prok-JAB
ApoLp-III
pre-PUA_NIP7
Motif
Other DBs
NCBI-GeneID:
110615651
NCBI-ProteinID:
XP_021613337
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All DBs
Position
5:14513950..14527640
Genome browser
AA seq
531 aa
AA seq
DB search
MRSSSTSGTINIAASAQKLDVDNRISLRYYYRIADNILKQADIFREEKNIIDLYIMLLRF
SSLVSETIPRHRDYGSSLQSKKIHLKKKLLNAVNELEELKPGVQQKINELNRKYTHQVNG
YGTHQHDSLEWPPVKKKTLTSYDMTKAVSPAARAFVYPGSRTQQLSHARPVEEQFRRISL
NLPRPREETLSRHSILGPNGLHGPWQPPRTDKGVQYPINLDLTPVEIPSLQQSTENGVRV
KEDSNSLELYSLQQSEENGFTMKLDTSRAEIEGPSLESVLTVNDDSQVQRAEALSSMISF
ETTEAPVQTDLIRQPSPPAVLAEVQDLIPSLSSQVTETENKLEICSPDDVRSESPLQLHI
STTMMENFMKLAKSNTDKNLETCGVLAGSLKNRKFYVTALIIPKQESTSDSCQTTNEEEI
FEVQDKRSLFPLGWIHTHPTQSCFMSSIDLHTHYSYQIMLPEAVAIVMAPRDTRKHGIFR
LTTPGGMSIIRHCQQRGFHPHNQPPDGGPLYKACTDVYMNPNLKFDVIDLR
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgaggtcatcttctacttccggcaccataaatattgctgcgagtgctcaaaaactcgat
gttgataatcggatttctcttcgatactactaccggatcgctgataatattctcaaacag
gctgacatctttcgagaagagaagaatatcatagatctgtatattatgctgttgaggttt
tctagcttggtatcagagacaataccacgtcatcgagattatgggtcatccttacaaagt
aaaaaaattcatttgaaaaagaaattattgaatgctgtaaatgagttggaggaattgaag
cctggagtgcagcagaagatcaatgaattaaacagaaaatacacgcatcaagtaaatggg
tatggcacccatcaacatgattcattagagtggccacctgtcaaaaagaaaactttgact
agctatgatatgacaaaggcagtgagcccagctgcacgagcgtttgtttatccaggttca
cgaactcaacaactttcacacgctaggccagtggaagagcagttcagaagaatatcttta
aatttgcctcgtcctagggaggagactctttctagacattctatattgggtccaaatggg
ctacatgggccatggcagccacctaggactgataaaggagtccaatatccaatcaactta
gacctcactccagttgaaatcccgagcttgcaacaatccactgaaaatggggttagagtg
aaagaggacagcaacagtttggagctttatagcctgcaacagtctgaagaaaatggattt
acaatgaaattagacactagcagagcagaaattgaaggcccaagtttagaatcagttctt
actgtgaatgatgatagtcaggtgcagcgtgctgaagctctttcttccatgatttccttt
gaaacaacagaagcccctgttcagacagatctgatcagacagccatctcctccagctgta
cttgctgaagtacaagatttgattccttcattgtcttcccaagttactgaaacagaaaat
aaactggagatttgctcacctgatgatgttcgttctgaatctcccctgcaactgcacatt
tcaacaacaatgatggagaatttcatgaagctggcgaagtcaaatactgataagaattta
gaaacttgtggtgtcctagctggttctcttaaaaacagaaagttttacgttactgctctc
attattccgaagcaggaatctacatcagattcgtgtcagaccacaaatgaagaggaaata
tttgaagtgcaggataagcgatctttattcccccttgggtggatacatacgcatcctaca
cagtcttgtttcatgtcatctattgatcttcacacccattattcatatcagattatgctg
ccagaagctgttgcaattgtcatggcaccaagagatacaagaaagcatggcatttttcgg
ttgacaacccctggtggcatgtcgatcataagacactgccagcaacgtggatttcatcca
cataatcaaccaccagatggcgggcccctttacaaagcctgtacagatgtctatatgaat
cccaacctgaagtttgatgttattgacctacggtga
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