Manihot esculenta (cassava): 110615668
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Entry
110615668 CDS
T05761
Name
(RefSeq) axial regulator YABBY 1
KO
K25796
plant-specific transcription factor YABBY family protein
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mesc03000
]
110615668
Transcription factors [BR:
mesc03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Yabby
110615668
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GFIT
Motif
Pfam:
YABBY
YABBY_N
HMG_box_2
HMG_box
Ccdc124
Zn_ribbon_Elf1
Zn_ribbon_12
Zn_ribbon_Com
Motif
Other DBs
NCBI-GeneID:
110615668
NCBI-ProteinID:
XP_021613358
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Position
5:3995677..3998467
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AA seq
212 aa
AA seq
DB search
MSSSSAAFSPDHLSPSDQLYYVHCNFCDTVLAVSVPCSSLFKTVTVRCGHCSNLLTGNMR
SLLLPAANQLHLGHAFFNPQNILEEIRSAAPPNMMINQPNPNDPLMPVRGGMEELPKPPV
VNRPPEKRQRVPSAYNRFIKDEIRRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLVPDQ
PVKKTNVRQQEGEDVLMKDGFFAPSNLGVAPF
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcctcatcagctgccttttcaccggaccacctctctccctccgaccagctttat
tacgtccattgcaacttttgtgacactgtcctcgcggtgagcgtcccttgctctagcttg
ttcaagaccgtgacggtccgatgcggccactgcagtaacctcttgaccgggaacatgcgt
agcctgcttcttcctgcggctaaccagctccaccttggtcatgctttcttcaatccgcag
aacatcctggaggagattcgcagcgcagcaccaccgaatatgatgataaatcagcccaac
ccaaatgacccacttatgccagtgagaggaggcatggaggagctccctaagccaccggtg
gtgaacagacctccggagaagagacagagagtcccatctgcctacaaccgctttatcaag
gacgagatccgacgcatcaaagctggaaaccctgatataagccacagagaggcctttagt
gcagctgcaaagaattgggcccactttccacacatccacttcggacttgtgcctgatcaa
cccgtgaagaaaactaacgtgcgccagcaggaaggagaggacgttctcatgaaagatggg
ttttttgctccttccaatctgggcgttgcccccttctaa
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