Manihot esculenta (cassava): 110615684
Help
Entry
110615684 CDS
T05761
Name
(RefSeq) RAN GTPase-activating protein 1
KO
K14319
Ran GTPase-activating protein 1
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110615684
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mesc03019
]
110615684
Messenger RNA biogenesis [BR:
mesc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
110615684
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WPP
LRR_NLRC3
LRR_6
LRR_CARMIL
LRR_TMOD-LMOD
LRR_1
LRR_NLRC4
LRR_4
Motif
Other DBs
NCBI-GeneID:
110615684
NCBI-ProteinID:
XP_021613387
LinkDB
All DBs
Position
5:complement(6236388..6239627)
Genome browser
AA seq
542 aa
AA seq
DB search
MDSTTQSFQHRTLHVKLWPPTQSTRLMLVERMTKNLITPSIISRKYGILSKEEAEEDARQ
IEESAFAAADQHHQKEPDGDGSSAVQVYAKESSKLMLEVLKRGPRMKEDGEAAVAEISAA
AHADLFDLSGGRRAFISAEEANDLLKPLKEPGNTYTKICFSNRSFGLDAAGVAEPILSSI
KDQLTEVDLSDFVAGRPEPEALQVMNIFSSALEGCNLRYLNLSNNALGEKGVRAFGALLR
SQNNLEELYLINDGISEEAARAVCELIPSTEKLKVLQFHNNMTGDEGAVAIAEIVKRSAM
LEDFRCSSTRIGSEGGVVLAEALGTCSHMRKLDLRDNMFGVEAGVALSKSLVAFADLTEV
YLSYLNLEDDGAEALANALKESAPSLEVLEMAGNDITAKGASSLAACIAAKQFLSKLNLS
ENELKDEGAILIAKAIESGHGQLSEVDLSTNSIRRAGARLLGQAVVLKPGFKLLNINGNF
ISDEGIDELKDIFKNLPGVLGPLDDNDPEGEDLDEEAKEEDADNEDDLESKLKGLEIKHD
EQ
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggattctacaacacaatctttccaacaccgaacacttcatgtcaaattgtggcctcct
actcagagtactaggctaatgcttgtggagcggatgacgaaaaatcttatcactccatct
attatttccagaaagtatggcatattgagtaaagaagaggctgaggaggatgccaggcaa
attgaagagtcggcatttgctgctgcagaccaacaccatcagaaggagcccgatggtgat
ggaagttcagcagtgcaggtttatgccaaagaatccagtaagctcatgctggaagttctt
aaaaggggccctagaatgaaagaggatggagaggcagcagtagctgagatatctgcagct
gcacatgctgatttatttgatttatctggtggtcgacgggcatttatcagtgcagaggag
gctaatgatcttttaaaaccacttaaggagccaggaaatacatatactaagatctgtttc
agcaatagaagttttggcttggatgctgctggtgttgcagagccaatcttgtcatcaata
aaggatcaattgacagaagtagacttatctgactttgttgcaggaagaccagagccggaa
gctcttcaagtcatgaatatattttcttcagccctggagggttgcaacttgaggtatctg
aacctttcaaacaatgccttgggggaaaagggtgtaagggcttttggagcacttctcaga
tcacagaataacttggaggagctttatctgataaatgatggtatctcagaggaagctgct
cgggctgtctgtgagctaatcccttccactgagaagctcaaggtccttcagtttcacaat
aacatgacaggtgatgaaggggcagttgctatagctgagattgtgaaacgatctgctatg
ctggaggattttcgatgttcttcaacaaggataggctcagagggcggtgtcgtactagct
gaagcccttggaacatgtagtcatatgcggaagcttgatctgcgtgacaatatgtttgga
gtggaagctggagttgcgttgagcaagtctcttgttgcatttgcagatcttactgaggtt
taccttagttatctaaacttggaggatgatggggctgaagcacttgccaatgctctaaag
gagtctgcaccttcacttgaagttcttgaaatggctggtaatgacattactgctaaagga
gcttcttctttggcagcttgtattgcagcaaaacagtttctcagcaagttaaacctttct
gagaatgaattgaaggatgaaggtgctattttgattgccaaggcaatagagagtggtcat
ggccagttaagtgaagttgatttgagcactaactcaatcagaagggctggggcaaggctt
ttgggacaggctgttgttcttaagcctggatttaagttgctaaatattaatggtaatttt
atatctgatgaagggattgatgaattgaaggatatattcaagaatttgcctggtgtgctt
gggcctttggatgataatgatccagaaggtgaagatcttgatgaggaggcaaaagaagaa
gatgcagacaatgaagatgatttggaatcaaaactcaaggggcttgagatcaagcatgat
gagcagtag
DBGET
integrated database retrieval system
