KEGG   Manihot esculenta (cassava): 110615720
Entry
110615720         CDS       T05761                                 
Name
(RefSeq) E3 ubiquitin-protein ligase ATL4
  KO
K10663  E3 ubiquitin-protein ligase ATL4 [EC:2.3.2.27]
Organism
mesc  Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:mesc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mesc04121]
    110615720
Enzymes [BR:mesc01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     110615720
Ubiquitin system [BR:mesc04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   ATL proteins
    110615720
SSDB
Motif
Pfam: zf-RING_2 zf-RING_11 zf-rbx1 zf-C3HC4 zf-C3HC4_2 zf-ANAPC11 zf-RING_5 zf-C3HC4_3 zf-RING_UBOX zf-RING_16
Other DBs
NCBI-GeneID: 110615720
NCBI-ProteinID: XP_021613459
LinkDB
Position
5:4864495..4866334
AA seq 331 aa
MSSSSPLSPPLLPFNSNTQDTHPSPFQNLKPSILVILLILSITFLLSISLCLLLRHLNRR
CLLHLSSSSHVSTATIPIATSSSSNRHSNNRVSPESPVSSLIDSLPLFTFSSIKRRSTTS
PADCAVCLSNFEPQDQLRLLPLCCHAFHVLCIDTWLQSNQTCPLCRLPIHASESDLLKAL
SSSIDGGISESFRLEIGSISCRQTASDSAVEHRSSYSVGSFEYIVDEEAEVTMSHMHRRS
VSEKEVAAPVHQSTQEPNLAFEVASGRSWLQDYVDRLSASLSSRAFSFRSSGRFFTGSSR
RSENVSTGDYDLEANRVVEEMNEIFRWFSGV
NT seq 996 nt   +upstreamnt  +downstreamnt
atgtcgtcgtcgtcgccgctgtcgcctcctcttcttcccttcaacagtaacactcaagat
acgcatccttctcctttccaaaatcttaaacctagcatccttgttattcttttgatcctc
tccattactttccttctttccatttctctctgtcttcttctccgccaccttaaccgccgt
tgtctcctccacctctcttcttcctctcatgtttccactgccaccattcccatcgccaca
tcctcttcttctaatcgccattccaacaatcgtgtttcacctgaaagtcctgtatcctct
ctcatcgattctctcccgctcttcaccttcagctccattaaacgccgttcgacaacctct
cccgctgattgtgccgtctgtttgtccaacttcgaaccgcaggatcaactccgtcttctt
ccgctctgttgccatgcttttcatgttctttgcatcgacacgtggcttcagtctaaccaa
acgtgtcctctttgccgattaccgattcatgcatccgagtctgatcttttgaaggcgcta
tctagctccattgatggaggcatttcagaaagcttccgccttgagattggctccattagc
tgccgtcaaacagcttccgattccgccgtcgagcatcgaagttcctattccgttggctct
ttcgagtacattgtggatgaagaagctgaggttactatgagtcacatgcacaggagaagc
gtttcagagaaggaagtcgcagctccagtacatcagtcgacgcaagagccgaacctagcc
ttcgaagtagccagcggaagaagttggcttcaggattacgttgacaggctctcggcttcg
ctctcatcacgtgctttttcgtttcgaagttctggaaggtttttcactggaagtagtcgc
cgaagtgagaatgtcagcaccggagattacgacttggaagcgaatcgggtggtggaagag
atgaacgaaatatttcgctggttctcaggggtatga

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