Manihot esculenta (cassava): 110615720
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Entry
110615720 CDS
T05761
Name
(RefSeq) E3 ubiquitin-protein ligase ATL4
KO
K10663
E3 ubiquitin-protein ligase ATL4 [EC:
2.3.2.27
]
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mesc04121
]
110615720
Enzymes [BR:
mesc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110615720
Ubiquitin system [BR:
mesc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
110615720
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-C3HC4_2
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
110615720
NCBI-ProteinID:
XP_021613459
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Position
5:4864495..4866334
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AA seq
331 aa
AA seq
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MSSSSPLSPPLLPFNSNTQDTHPSPFQNLKPSILVILLILSITFLLSISLCLLLRHLNRR
CLLHLSSSSHVSTATIPIATSSSSNRHSNNRVSPESPVSSLIDSLPLFTFSSIKRRSTTS
PADCAVCLSNFEPQDQLRLLPLCCHAFHVLCIDTWLQSNQTCPLCRLPIHASESDLLKAL
SSSIDGGISESFRLEIGSISCRQTASDSAVEHRSSYSVGSFEYIVDEEAEVTMSHMHRRS
VSEKEVAAPVHQSTQEPNLAFEVASGRSWLQDYVDRLSASLSSRAFSFRSSGRFFTGSSR
RSENVSTGDYDLEANRVVEEMNEIFRWFSGV
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgtcgtcgccgctgtcgcctcctcttcttcccttcaacagtaacactcaagat
acgcatccttctcctttccaaaatcttaaacctagcatccttgttattcttttgatcctc
tccattactttccttctttccatttctctctgtcttcttctccgccaccttaaccgccgt
tgtctcctccacctctcttcttcctctcatgtttccactgccaccattcccatcgccaca
tcctcttcttctaatcgccattccaacaatcgtgtttcacctgaaagtcctgtatcctct
ctcatcgattctctcccgctcttcaccttcagctccattaaacgccgttcgacaacctct
cccgctgattgtgccgtctgtttgtccaacttcgaaccgcaggatcaactccgtcttctt
ccgctctgttgccatgcttttcatgttctttgcatcgacacgtggcttcagtctaaccaa
acgtgtcctctttgccgattaccgattcatgcatccgagtctgatcttttgaaggcgcta
tctagctccattgatggaggcatttcagaaagcttccgccttgagattggctccattagc
tgccgtcaaacagcttccgattccgccgtcgagcatcgaagttcctattccgttggctct
ttcgagtacattgtggatgaagaagctgaggttactatgagtcacatgcacaggagaagc
gtttcagagaaggaagtcgcagctccagtacatcagtcgacgcaagagccgaacctagcc
ttcgaagtagccagcggaagaagttggcttcaggattacgttgacaggctctcggcttcg
ctctcatcacgtgctttttcgtttcgaagttctggaaggtttttcactggaagtagtcgc
cgaagtgagaatgtcagcaccggagattacgacttggaagcgaatcgggtggtggaagag
atgaacgaaatatttcgctggttctcaggggtatga
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