Manihot esculenta (cassava): 110615734
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Entry
110615734 CDS
T05761
Name
(RefSeq) cellulose synthase-like protein D5
KO
K00770
1,4-beta-D-xylan synthase [EC:
2.4.2.24
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc00520
Amino sugar and nucleotide sugar metabolism
mesc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
110615734
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
mesc01003
]
110615734
Enzymes [BR:
mesc01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.24 1,4-beta-D-xylan synthase
110615734
Glycosyltransferases [BR:
mesc01003
]
Polysaccharide
Structural polysaccharide
110615734
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cellulose_synt
zf-RING_4
Glyco_tranf_2_3
zf-UDP
Xin
S6OS1
Baculo_IE-1
Motif
Other DBs
NCBI-GeneID:
110615734
NCBI-ProteinID:
XP_021613480
LinkDB
All DBs
Position
5:126087..130459
Genome browser
AA seq
1160 aa
AA seq
DB search
MVKTVDSPSSPVTITVSSGGKGGGSRSMGLTSPVPRASISNNQNSPLNNSKNRTSSGGRY
CSMSKDDTTEEINSEYFTYTVHIPPTPDHQPMSVSQTSLSEDINNADKPERSFISGTIFT
GGFNSVTRGHVIDCSMEVTKSLKSGLVCGMKGCDDKAIQGKCECGFKICSDCYLDCVGSN
GLGHCPGCKEPYKDVDDNDFTEDDEAKSEEEDQALPLPKLDKRLSLVKSFKAMSHPPDFD
HTRWLFETKGTYGYGNAVWPKDGYGAGSGANGFEHPPDFGERSRRPLTRKVGVSAAILSP
YRLLIAIRLAALGMFLAWRIRHPNREAMWLWGMSITCETWFAISWLLDQLPKLCPVNRVT
DLSVLKDRFESPNLRNPKGRSDLPGIDVFVSTADPEKEPPMVTANTILSILAVDYPVEKL
ACYLSDDGGSLLTFEALAETASFARIWIPFCRKHNIEPRNPEAYFGQKRDFLKNKVRLDF
VRERRRVKREYDEFKVRINSLPDSIRRRSDAYNAHEELRAKKKQMEMGGNPSEPIKVPKA
TWMSDGSHWPGTWASGETDHSRGDHAGIIQAMLAPSNAEPVFGAEADGENLIDTSEVDVR
LPMLVYVSREKRPGYDHNKKAGAMNALVRTSAIMSNGPFILNLDCDHYIYNSLALREGMC
FMLDRGGDRICYVQFPQRFEGIDPSDRYANHNTVFFDVSMRALDGLQGPMYVGTGCIFRR
TALYGFSPPRTTEHHGWLGRKKVKLFLRKPKTTKKQEDEIALPINGEHNDDDADIESLLL
PKRFGNSTSLAASIPIAEYQGRLLQDVQGKGNQGRPAGSLAVPREPLDAAIVAEAISVIS
CFYEDKTEWGKRVGWIYGSVTEDVVTGYRMHNRGWRSVYCVTKRDAFRGTAPINLTDRLH
QVLRWATGSVEIFFSRNNALFASPRMKFLQRVAYFNVGMYPFTSMFLLVYCILPAVSLFS
GQFIVQSLSVTFLVFLLAITITLCLLALLEIKWSGITLHDWWRNEQFWLIGGTSAHPAAV
LQGLLKVIAGVDISFTLTSKSATPDEGDDEFAELYMVKWSYLMVPPITIMMLNVIAIAVG
VSRTMYSTYPQWSKLVGGVFFSFWVLSHLYPFAKGLMGRRGKVPTIVYVWSGLLSIIISL
LWVYISPPSGREDYMKFHFP
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaaacagttgattctccatcttctccggtgaccataacggtctcttcagggggc
aaaggcggaggaagtagaagcatgggattaacaagtccagtaccaagagcttcaatatca
aacaaccaaaattccccactaaacaacagcaagaaccggacctcaagcggaggcagatac
tgctcaatgtctaaagatgataccaccgaggagatcaactcagaatatttcacttataca
gttcatatacctcctactccagaccatcagccaatgtcagtctcacagacaagcctctct
gaagatatcaacaacgctgacaagcctgagaggagtttcatttcgggtactatcttcact
ggtggtttcaattcggtgacgcgtggtcatgtgattgactgctcgatggaagtaaccaag
tcactgaaatcagggcttgtttgtgggatgaaaggttgcgatgataaagcaattcaagga
aaatgcgagtgtggattcaagatttgtagtgattgttatttggattgtgtggggtctaat
ggactgggacattgtcctggttgcaaagaaccctacaaggatgttgatgataatgatttt
actgaagatgatgaagctaaaagcgaagaagaagaccaagcgttgccgttgcctaagttg
gacaagagactttcccttgtgaagtcattcaaggcgatgagtcatcctcctgattttgat
cacacgcgctggttgtttgagacaaagggaacttacggatatgggaatgcggtgtggcct
aaagatggttatggagctgggtcaggcgcaaatggatttgagcatcctccagattttgga
gagagaagcaggaggcctttgactaggaaggttggggtttccgctgcaattctcagcccc
tacagactactaattgcaatacgtctggctgcccttggcatgttccttgcatggagaatt
cgacaccctaatcgcgaggcaatgtggttatggggaatgtccataacttgtgagacctgg
tttgccatttcatggcttcttgatcagcttcctaagctctgccctgtaaatagggtgact
gacctttctgtgctaaaagatcgctttgaatcccccaatcttcgaaacccaaaaggccga
tcagaccttcccggcattgatgtgtttgtttcaacagcagatcctgagaaagaaccccct
atggtcactgcaaataccattctttcaattcttgcagttgattatccggtggaaaagcta
gcttgttacttgtccgatgatggtggatctcttttgacgtttgaagctctagctgagact
gctagctttgccagaatctggattcctttttgcagaaaacacaacatagaacccaggaac
cctgaggcttattttgggcagaagcgtgatttccttaagaacaaagtaaggctcgacttt
gttagagagaggagaagagtgaagagggaatatgatgaattcaaggtgaggattaattcg
ttgcctgactcaataaggagaagatcagatgcttataatgcccatgaagagcttcgagcg
aagaagaaacagatggaaatgggtggcaatccatcagaacctattaaggtaccaaaggct
acatggatgtcagatggttctcattggcctgggacttgggcttcaggagagaccgaccat
tcaaggggagaccatgctggtattattcaggcaatgttagccccatcaaatgcagaacct
gtttttggggcagaagcagatggggagaatttgatcgacacatcagaagttgatgtcaga
ttgccaatgttggtttatgtgtctcgtgagaaaaggccaggttatgatcacaacaagaaa
gcgggagctatgaatgctctagttagaacaagtgcaatcatgtcaaatggtccattcatt
ttaaatctcgactgtgatcactacatttacaactctctggcattaagggagggaatgtgc
tttatgcttgatagaggtggtgacaggatctgttatgttcagtttccacaaaggtttgag
gggattgatccaagtgatcgctatgctaaccacaacacggtgttctttgatgtgagcatg
agagctcttgatgggttgcagggtccaatgtatgtaggaactggttgcattttccgcaga
acagctctgtatgggtttagtcctcctagaaccacagaacaccatggatggttaggtaga
aagaaagtcaagttgtttttgaggaaacccaagacgacaaagaaacaagaggatgagata
gcactgccaatcaatggggaacacaatgacgatgatgcagatattgagtctttgcttcta
ccaaaaagatttggaaactccacttccctggctgcatctatccccattgcagagtaccaa
ggaaggctgcttcaagatgtgcaaggaaagggtaatcaaggaagaccagctggttccctt
gctgttccgagggagcctttggatgctgcaattgttgcagaggcaattagtgttatctct
tgcttctatgaggacaaaactgagtggggcaaaagggtgggatggatatatggttctgtg
acagaagatgtggtgactggatatcgaatgcacaatcgaggatggaggtctgtgtattgt
gtaaccaaaagggacgcctttcgtggcacagctccaatcaatcttacagacaggcttcac
caagtgcttagatgggcaactggttcagttgaaatatttttttcaaggaacaatgcacta
tttgctagtcctcggatgaaattcttacagagggtggcatatttcaatgtagggatgtac
ccttttacctctatgtttctcctagtgtattgcatcctacctgcagtatctctattttct
ggtcaattcattgtgcaatctctcagcgtgactttcctagtgttcttgctggccatcact
attaccctatgcttgcttgcactcctggaaatcaagtggtcaggaattactctccatgat
tggtggcgaaatgaacagttttggttgattgggggaaccagtgcgcatcctgcagcagtg
ttacaaggactgctaaaagttatagcaggagttgacatctcattcacattgacgtctaaa
tctgccacacctgatgagggagatgatgagtttgctgagctctatatggtgaaatggagc
tacttaatggtacctccaatcacaataatgatgttgaacgtaattgcaattgcagtagga
gtatcaaggaccatgtacagtacttatccacaatggagcaagcttgtcgggggggtgttc
ttcagcttctgggtattgtcccatctatacccattcgcgaaaggcctaatgggaagaagg
gggaaggtcccaaccattgtatatgtttggtccggattgctctctatcatcatttctctg
ctctgggtgtacattagtcctccttctggaagagaagactacatgaagtttcatttccct
tga
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