KEGG   Manihot esculenta (cassava): 110615796
Entry
110615796         CDS       T05761                                 
Name
(RefSeq) autophagy-related protein 18a
  KO
K22991  WD repeat-containing protein 45
Organism
mesc  Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:mesc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mesc04131]
    110615796
Membrane trafficking [BR:mesc04131]
 Autophagy
  Other autophagy associated proteins
   Others
    110615796
SSDB
Motif
Pfam: PROPPIN WD40_WDHD1_1st Beta-prop_EML_2 WD40 WD40_CDC20-Fz WD40_Prp19 ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd BCAS3_WD40 WDR55 Beta-prop_EML Beta-prop_Vps41 Beta-prop_WDR19_1st Beta-prop_IFT122_1st Beta-prop_HPS5 WD40_MABP1-WDR62_2nd PEP5_VPS11_N DUF6923 DUF7099 Ge1_WD40 Beta-prop_TEP1_2nd Beta-prop_IFT80_2nd
Other DBs
NCBI-GeneID: 110615796
NCBI-ProteinID: XP_021613597
LinkDB
Position
5:complement(5376048..5380978)
AA seq 431 aa
MATLSAYSPPWPNPNPNATLLSTQEAVEGLESQSQSQNSYHSLSSIMPQDQLTDQLSPVN
PDPNYHASLSSPPDSTLPVSLLHLTFNQDFGCFSAGTDHGFRIYNCDPFREIFRRDFDCG
GGGGIGVVEMLFRCNILALVGGGSVPQYPPNKVMIWDDHQNRCIGELSFRSEVRSVKLRR
DRIIVVLEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGAGSLVLVCPGLQKGQVRVEH
YASKRTKFIMAHDSRIACFALTHDGQLLATASTKGTLVRIFNTADGTLLQEVRRGADRAE
IYSLAFSSTAQWLAVSSDKGTVHVFSLKIPGSPAADKLWNTPDSNSAVNSSTSPLSFFKG
VLPKYFSSEWSVAQFRLVEGSQYVVAFGHQKNTILILGLDGSFYRCQFDPVNGGEMTQLE
YHNFLKPEAAF
NT seq 1296 nt   +upstreamnt  +downstreamnt
atggcgaccctctccgcctactctcctccgtggccaaatccaaaccctaacgctactctt
ctatctacgcaggaagctgtggaaggactcgagtcacagtcacaatcccaaaattcttac
cactcgctttcttcaattatgcctcaagatcaacttaccgatcagctttcgcctgtcaat
cctgaccccaattaccatgcttctttatcttcaccgccggactccaccttgccagtttct
ctacttcacctcacattcaaccaggattttggatgtttctctgcgggtacggaccacggg
tttcgtatctacaactgcgacccgtttcgggagatattccgccgggattttgattgcggc
gggggaggcggcatcggagtcgttgagatgcttttccgttgtaatattttggcccttgtc
ggcggtggatccgtccctcagtatcctcctaacaaggtcatgatctgggacgaccatcag
aatcgctgcattggggagctctcttttaggtctgaggttcgatccgttaagcttagacgg
gatagaattattgtggtcctggagcagaagatttttgtgtataatttcgcggatttgaag
ctgttgcatcagattgagacgatcgcaaatcccaaaggtctctgtgcagtgtcgcagggg
gcgggttccttggtattggtttgtccaggattgcagaagggccaggttagggtggagcat
tacgcgtcgaaacggaccaagtttattatggcccatgattcgaggattgcttgttttgct
ctcacgcatgatgggcagttgctagccactgccagcacgaagggcactctggttcggatt
ttcaatacggctgatggtactctgctgcaagaggtaaggaggggtgcagatagagcagaa
atatatagtttggcattctcgtcaactgcccagtggctggcagtctcaagtgacaagggt
actgtccatgttttcagccttaagattcctggatctccagcggctgataagttatggaat
acacctgattctaattctgcagttaattcttccacctcacctttgtccttctttaaaggt
gtcctgccaaagtatttcagttcagagtggtcggtggctcagtttcgtttagttgaaggt
tctcagtacgttgttgcttttggccaccaaaagaatacaattctaattcttggcttggat
ggaagcttctatagatgtcaatttgaccctgtgaatggtggagagatgacacaactggaa
tatcacaacttcttgaagccagaagcagctttctga

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