KEGG   Manihot esculenta (cassava): 110615869
Entry
110615869         CDS       T05761                                 
Name
(RefSeq) splicing factor U2af small subunit B
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
mesc  Manihot esculenta (cassava)
Pathway
mesc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mesc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110615869
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mesc03041]
    110615869
Spliceosome [BR:mesc03041]
 Complex A
  U2 snRNP components
   U2 related factors
    110615869
 Complex B
    110615869
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 Torus zf-CCCH_4
Other DBs
NCBI-GeneID: 110615869
NCBI-ProteinID: XP_021613742
LinkDB
Position
5:22192257..22193631
AA seq 280 aa
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP
GVDAQGQPIDPRKIQEHFEDFYEDIFEELGKFGEIESLNVCDNLADHMIGNVYVQFREEE
QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKLIGREL
RRKLFGRYRGYRRSRSRSRSGSPRHRRDRDIDRREKDFRDRDRDFRGNGRKSGDRHDRYD
RDGGRRRHGSPRRSRSPVREGSEERRARIEQWNREREEKQ
NT seq 843 nt   +upstreamnt  +downstreamnt
atggcggagcacttggcttcaattttcggcaccgagaaggaccgcgttaactgcccattc
tacttcaagatcggggcatgccgccacggagatcgttgctcccgcctccacaatcgcccc
acaatatcgccaactctccttctttccaatatgtatcagcgccccgatatgatcaccccg
ggcgtcgatgcccagggccagcccatcgacccccgaaagatccaggaacacttcgaggac
ttctacgaagacattttcgaagaactcggaaaatttggtgagatcgagagcctcaacgtc
tgcgataatctcgccgaccacatgatcggtaacgtctatgtccagttcagggaggaggag
caggccgccgctgcgttgcaagctctgcagggtcgcttctactcaggtcgcccgattatt
gctgatttttcgccggtgactgatttccgcgaagctacgtgcaggcaatatgaggaaaat
aattgtaaccgtgggggttactgtaacttcatgcacgtgaagttaattgggagagagttg
aggaggaaactgttcggaaggtaccgtggatacagacgtagtaggagccggagccggagc
ggtagtccaaggcaccggagggatagggatattgataggcgcgagaaggattttcgggac
cgagaccgtgatttccgtgggaatgggcgtaagagcggagacaggcacgacaggtatgat
agagatggtggcagaagaagacacggtagtcccaggcggagcaggagcccagtcagggaa
ggcagtgaagaacgcagagccaggattgaacaatggaacagagagagggaggagaagcag
tga

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