Manihot esculenta (cassava): 110615882
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Entry
110615882 CDS
T05761
Name
(RefSeq) SKP1-like protein 1B
KO
K03094
S-phase kinase-associated protein 1
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03083
Polycomb repressive complex
mesc04120
Ubiquitin mediated proteolysis
mesc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
110615882
04120 Ubiquitin mediated proteolysis
110615882
09126 Chromosome
03083 Polycomb repressive complex
110615882
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mesc04131
]
110615882
04121 Ubiquitin system [BR:
mesc04121
]
110615882
03036 Chromosome and associated proteins [BR:
mesc03036
]
110615882
Membrane trafficking [BR:
mesc04131
]
Endosome - Lysosome transport
Acidification regulators
RAVE complex
110615882
Ubiquitin system [BR:
mesc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Adaptor protein
110615882
Cul7 complex
110615882
Chromosome and associated proteins [BR:
mesc03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
110615882
Centromeric chromatin formation proteins
Kinetochore proteins
CBF3 complex
110615882
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Skp1
Skp1_POZ
Methyltransf_16
Motif
Other DBs
NCBI-GeneID:
110615882
NCBI-ProteinID:
XP_021613760
LinkDB
All DBs
Position
5:complement(24631828..24634343)
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AA seq
157 aa
AA seq
DB search
MSTGRKITLKSSDGETFEMDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYC
KKHVETPKSEDRPSSVDDELKAWDAEFVKVDQATLFDLILAANYLNIKSLLDLTCQTVAD
MIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE
NT seq
474 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaccggcaggaagatcacgttgaaaagctctgacggagagacctttgagatggac
gaggcggtggctctcgaatctcagacgataaagcacatgatagaggacgactgcgccgat
aacggtatccctcttcctaatgtcaccagcaagatcctctctaaggtaatcgagtattgc
aagaagcacgtcgagactcccaagtccgaagatcgtccctcttctgtcgacgacgagttg
aaggcgtgggacgctgagtttgtcaaagttgatcaggctactctcttcgatctcattctg
gctgccaactatctaaacatcaaaagcttgctggatctcacttgtcagactgtagcggac
atgatcaagggcaaaactccagaagaaattcgcaagactttcaacatcaagaatgacttt
acaccagaggaagaggaggaagttcgcagagagaaccaatgggcctttgaataa
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integrated database retrieval system