KEGG   Manihot esculenta (cassava): 110615882
Entry
110615882         CDS       T05761                                 
Name
(RefSeq) SKP1-like protein 1B
  KO
K03094  S-phase kinase-associated protein 1
Organism
mesc  Manihot esculenta (cassava)
Pathway
mesc03083  Polycomb repressive complex
mesc04120  Ubiquitin mediated proteolysis
mesc04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:mesc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    110615882
   04120 Ubiquitin mediated proteolysis
    110615882
  09126 Chromosome
   03083 Polycomb repressive complex
    110615882
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mesc04131]
    110615882
   04121 Ubiquitin system [BR:mesc04121]
    110615882
   03036 Chromosome and associated proteins [BR:mesc03036]
    110615882
Membrane trafficking [BR:mesc04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    110615882
Ubiquitin system [BR:mesc04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     110615882
   Cul7 complex
     110615882
Chromosome and associated proteins [BR:mesc03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     110615882
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     110615882
SSDB
Motif
Pfam: Skp1 Skp1_POZ Methyltransf_16
Other DBs
NCBI-GeneID: 110615882
NCBI-ProteinID: XP_021613760
LinkDB
Position
5:complement(24631828..24634343)
AA seq 157 aa
MSTGRKITLKSSDGETFEMDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYC
KKHVETPKSEDRPSSVDDELKAWDAEFVKVDQATLFDLILAANYLNIKSLLDLTCQTVAD
MIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE
NT seq 474 nt   +upstreamnt  +downstreamnt
atgtcaaccggcaggaagatcacgttgaaaagctctgacggagagacctttgagatggac
gaggcggtggctctcgaatctcagacgataaagcacatgatagaggacgactgcgccgat
aacggtatccctcttcctaatgtcaccagcaagatcctctctaaggtaatcgagtattgc
aagaagcacgtcgagactcccaagtccgaagatcgtccctcttctgtcgacgacgagttg
aaggcgtgggacgctgagtttgtcaaagttgatcaggctactctcttcgatctcattctg
gctgccaactatctaaacatcaaaagcttgctggatctcacttgtcagactgtagcggac
atgatcaagggcaaaactccagaagaaattcgcaagactttcaacatcaagaatgacttt
acaccagaggaagaggaggaagttcgcagagagaaccaatgggcctttgaataa

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