Manihot esculenta (cassava): 110615984
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Entry
110615984 CDS
T05761
Name
(RefSeq) protein mago nashi homolog
KO
K12877
protein mago nashi
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03013
Nucleocytoplasmic transport
mesc03015
mRNA surveillance pathway
mesc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110615984
09122 Translation
03013 Nucleocytoplasmic transport
110615984
03015 mRNA surveillance pathway
110615984
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mesc03019
]
110615984
03041 Spliceosome [BR:
mesc03041
]
110615984
Messenger RNA biogenesis [BR:
mesc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
110615984
Spliceosome [BR:
mesc03041
]
Complex C
Other components
EJC/TREX
110615984
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mago_nashi
Motif
Other DBs
NCBI-GeneID:
110615984
NCBI-ProteinID:
XP_021613956
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All DBs
Position
5:4649658..4652480
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AA seq
151 aa
AA seq
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MAMAAEDDEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFLTPA
VLKECRRIISESEIMKEDDANWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSKD
PEGLRIFYYLVQDLKCFVFSLISLHFKIKPI
NT seq
456 nt
NT seq
+upstream
nt +downstream
nt
atggcaatggctgcagaagacgatgagttctaccttcgatattacgtgggacacaagggg
aaatttggccacgaattccttgagttcgagtttaggccagatggcaagcttcgatacgcc
aacaattccaattacaagaacgacaccatgatccgcaaggaggtcttcctcacccctgcc
gtccttaaggagtgccgtcgtatcatctcagagagcgagataatgaaggaagacgatgcc
aactggccagaaccagacagggttgggcgacaagagcttgagattgtgatgggtaacgag
catatctccttcactacctccaagattgggtcgcttgttgatgtccagagtagtaaggat
cctgaaggacttcgcatcttctattaccttgttcaggacttgaagtgctttgtcttctct
cttatctcactacacttcaagatcaagcctatttaa
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