Manihot esculenta (cassava): 110616022
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Entry
110616022 CDS
T05761
Name
(RefSeq) E3 ubiquitin-protein ligase SP1
KO
K15688
E3 ubiquitin-protein ligase MUL1 [EC:
2.3.2.27
]
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mesc04121
]
110616022
Enzymes [BR:
mesc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110616022
Ubiquitin system [BR:
mesc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110616022
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GIDE
zf-C3HC4_3
Prok-RING_4
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
110616022
NCBI-ProteinID:
XP_021614013
LinkDB
All DBs
Position
5:complement(5997241..6004713)
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AA seq
344 aa
AA seq
DB search
MLPWGGISCCLSAAALYLLGRSSGRDAEVLKSVTRVNQLKELAKLLDIESNISPSVVSIS
GRVGSETPINCEYSGLRGVIVEETAEQHFLKHNDAGSWIQDSALMLSMSKEVPWYLDDGT
DRVYVVGARGASGFVLTVGSEVFEESGRSLVRGTLDYLQGLKMLGVKRIERVLPTGTSLT
VVGEAVKDDIGTVRVQRPHKGPFYVSPRTIDELIGNLGKWARWYRYASVSLTVFGAFLIA
KHAIQYIMERRRRWELQSRVLAAAAAKRQGQDSEGSNGKAENGSDNSKRERPVPDLCVIC
LEQEYNAVFLPCGHMCCCTTCSSHLTNCPLCRRRIEQVVKTFRH
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgcttccgtggggtggaattagttgctgcttgagtgctgctgcgctttatttgcttggc
aggagcagtggcagggacgccgaggttcttaagtcggtcacaagagtcaatcaactgaag
gaattagcaaaattacttgatattgaaagcaacatctcaccgtcggttgtttctatctct
ggaagagttggctctgagactccaatcaattgcgagtatagtggcttgagaggtgttata
gtagaggagacggctgagcaacacttcctcaagcacaacgatgctggatcttggattcaa
gactcagccttaatgctatcaatgagtaaagaggtgccatggtacctggatgatggaact
gatcgagtatatgttgtgggggcccggggtgcctcaggttttgtgttaactgttggaagt
gaagtttttgaagagtcaggacgatcacttgtacgtggaacattagactatctccaaggc
ctcaagatgcttggtgtgaagcgtattgaaagggtacttccaactggtacttcattaacg
gtggttggtgaggctgtcaaagatgatattggaactgttcgggtccagcgtccccacaaa
gggccattttacgtttctcctaggactattgatgaactcattgggaatttgggaaagtgg
gcaaggtggtatagatatgcctcagtcagcttgacagtttttggcgcttttctgattgcc
aagcatgctatacagtatatcatggaaagaaggcgccgttgggaattgcagagcagggtt
cttgctgctgctgctgctaagagacaaggtcaagattctgaaggttcaaatggaaaagca
gagaatggatccgacaattctaagagggaacgtccagttccagatctctgtgtaatatgc
cttgagcaggagtataatgccgtttttctcccgtgcggccatatgtgctgttgtacaaca
tgctcttcacatctgacaaactgtcctctgtgccggagacggatagagcaggtagtgaag
actttccgccactga
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