Manihot esculenta (cassava): 110616059
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Entry
110616059 CDS
T05761
Name
(RefSeq) rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
110616059
Enzymes [BR:
mesc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
110616059
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
Endotoxin_C
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
110616059
NCBI-ProteinID:
XP_021614061
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Position
5:31009586..31014546
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AA seq
638 aa
AA seq
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MPPRGVQLIIQDRHVMIDNGILQVTLSNPEGIVTGIRYNGIDNLLEVLNEESNRGYWDLV
WSTQGTTGTTGIFDVIKGTSLKVIVESEEQVELSFTRSWDPSLEGKLVPLNIDKRFVMLR
GSSGFYSYSIYEHLQEWPGFNLGETRIAFKLRKDKFHYMAVADNRQRYMPLPDDRLPPRG
QALAYPEAVLLVNPVEPDLKGEVDDKYQYSSENKDNRVHGWICMDPPVGFWQITPSNEFR
SGGPLKQNLTSHVGPTTLAMFLSAHYSGEDLVPKFQAGEAWKKVFGPVFMYVNSAMLGDD
PLSLWEDAKEQMEIEVQSWPYCFPASEDFQKSDQRGNVSGRLLVKDRFLSDDYISANGAY
VGLGPPGDVGSWQRECKDYQFWSKADENGYFSINDIRTGDYNLYAWVPDFIGDYRYEVVI
TITTGCDIDMGDLVFEPPRDGPTLWEIGIPDRSAAEFYVPDPNPSYINKLYVNHPDRFRQ
YGLWERYAELYPNGDLVYTIGSSDFTKDWFFAQVTRKKDDNTYQRTTWQIKFKLDSADQN
GIYKLRIALASATVSELQVRINDPKANPIFSSGLIGKDNSIARHGIHGLYWLYNVDVGGT
LLVQGDNTLFLTQPRSASPFQAILYDYLRFEAPSSSSP
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgccacctcgaggggtgcagctcattattcaagatcgtcatgtgatgattgataatgga
atactgcaagtcactctttcgaatccagaaggaatcgtcactggcatacgttataatgga
atcgacaatttgcttgaagttcttaatgaagaatctaatagagggtattgggacctcgtt
tggagcacacaaggaactacgggaacgactgggatttttgatgtgattaaaggaacaagt
ttaaaggtgatagtagaaagtgaagaacaagtggagctctcattcactcgatcatgggat
ccctctctggagggcaagctcgttcctttgaacatagacaaaaggtttgtaatgcttcgt
ggctcctcaggcttctactcgtactccatctatgagcacttacaagaatggcctggtttc
aatcttggcgagaccagaattgctttcaagcttagaaaagacaagtttcattacatggcc
gtagcagacaacagacaaaggtacatgcccttacccgatgatcgtttgccgccgagaggg
caagctctggcctatcctgaggcagtgttacttgtgaatcctgttgagcctgacttaaaa
ggagaggttgatgacaagtaccaatattcatccgaaaacaaagacaatcgtgtgcatggc
tggatttgcatggacccacctgtggggttctggcaaatcacacctagcaacgagtttaga
tctggtggacccctcaagcagaacttgacctcccatgttggtcccaccaccctcgcaatg
tttctcagtgctcattattccggcgaagatttggttccaaaatttcaagctggtgaagcc
tggaagaaagtgtttggtcccgttttcatgtatgttaattctgccatgcttggagatgat
ccgctttcactttgggaggatgctaaagagcagatggagattgaagtccaaagttggccc
tattgtttcccagcctctgaagatttccaaaagtcagatcaacgaggcaatgttagtggc
agactgctagtgaaagataggtttcttagtgatgactacatatcagcaaatggggcttac
gttggattgggtccaccaggtgatgttggctcgtggcaaagggaatgcaaggactaccaa
ttctggagtaaagcagatgagaatgggtatttttcaattaatgacatacgaactggcgac
tacaatctttacgcctgggttcctgattttatcggtgattatcgatatgaagttgttatt
accataactactggttgcgatattgacatgggtgatttggtgtttgagcctccaagagat
ggccccacattgtgggaaataggaattcctgatcgttctgctgcagagttctatgttcct
gatccaaatccttcgtacatcaataaactctatgttaatcatcctgacaggtttaggcaa
tatggattgtgggagagatatgctgaattatatcccaatggagatctagtttacaccatt
ggttctagcgattttactaaagattggttctttgcccaagttaccaggaagaaagatgac
aatacataccagagaacgacatggcaaatcaagttcaaacttgatagtgctgatcaaaac
ggcatttacaaactgcgaatcgcacttgcatcggcaacagtttctgaattacaggttcgg
atcaacgacccaaaagcgaatccaatattctcgagcggactgatagggaaggataattca
atagcgagacatggaattcatgggctctactggctgtacaacgttgatgtcggaggcact
ctgcttgttcaaggagataatactttgtttctcacgcagccacgaagcgccagccctttc
caggccattttgtatgattatcttcgttttgaagcaccttcatcttcttctccttaa
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