Manihot esculenta (cassava): 110616063
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Entry
110616063 CDS
T05761
Name
(RefSeq) agamous-like MADS-box protein AP1
KO
K09264
MADS-box transcription factor, plant
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mesc03000
]
110616063
Transcription factors [BR:
mesc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, Homeotic genes
110616063
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GFIT
Motif
Pfam:
K-box
SRF-TF
Exonuc_VII_L
FliD_C
Motif
Other DBs
NCBI-GeneID:
110616063
NCBI-ProteinID:
XP_021614064
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Position
5:11358421..11363985
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AA seq
242 aa
AA seq
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MGRGRVQLKRIDNKINRQVTFSKRRAGLLKKAHEISVLCDAEVALIVFSQKGKLFEYSTD
SCMEKILERYERYSYAERQIISTDLNSQENWTLEYNRLKAKVELLQRNHRHYMGEDIESL
SLKELQNLEQQLDTALKHIRARKNQLMYESISELQKKEKAIQEQNSMLTKQIKEKEKAVA
QQALWEQHNHGTNMSPFLLPQPPLPCLNIGVNYQEEAPEVRRNELDLTLEPLYSCHLGCF
TS
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atggggagaggtagggttcagttgaagaggatagataacaagatcaaccgccaggtgaca
ttttccaaaaggagagctgggttgttgaagaaggctcatgagatctcagtcttgtgtgat
gctgaagtcgctttgatcgtcttctctcagaaagggaagctctttgaatactctactgat
tcttgcatggagaagattcttgaacgctatgagaggtattcttatgcggagaggcaaatc
atatccactgatcttaattcacaggagaattggacccttgaatataacagactcaaggca
aaggttgagcttttacagagaaaccataggcactacatgggagaagatatagaatcgttg
agtctgaaagagctgcaaaacttggagcaacagcttgacacagctcttaagcacattcgg
gcgagaaaaaaccaactgatgtatgagtccatctctgagcttcagaaaaaggagaaggca
attcaagagcaaaatagcatgctaacaaaacagatcaaggaaaaagagaaggcagtggca
cagcaggcactctgggagcaacacaaccatggaactaatatgtcacccttccttctgcca
cagccaccactcccatgtctaaacattggagtcaattaccaggaagaagcaccagaagtg
aggaggaatgaactcgatctcactctggagccactgtattcgtgccaccttggatgcttt
acctcatga
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