Manihot esculenta (cassava): 110616074
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Entry
110616074 CDS
T05761
Name
(RefSeq) protein ELC-like
KO
K12183
ESCRT-I complex subunit TSG101
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03250
Viral life cycle - HIV-1
mesc03272
Virion - Hepatitis viruses
mesc04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
110616074
03272 Virion - Hepatitis viruses
110616074
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
110616074
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mesc04131
]
110616074
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mesc04147
]
110616074
Membrane trafficking [BR:
mesc04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
110616074
Exosome [BR:
mesc04147
]
Exosomal proteins
Proteins found in most exosomes
110616074
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UEV
Vps23_core
RWD
DUF4806
Motif
Other DBs
NCBI-GeneID:
110616074
NCBI-ProteinID:
XP_021614082
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Position
5:6850620..6851732
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AA seq
342 aa
AA seq
DB search
MAPPASSIQFIDTALSCTSPHALSYPDPKQKWLIRKHLLSLIQEYPSFTPSTDTFTHNNG
TAVNLLNVTGELRVTRYTPHVPLTIWLHEKYPYMPPLVFVLANSMTPIHRDHPFVDLSGS
TSSPYLQTWIFPRCNLIDLVRNLVRIFSRDHPFIYGSAVASFTHPSLVSKMEALDRLSGM
LHYDMTAFLVKNEEELEDLSKLQEELIKRETITRNMISSLEQEKSSLKDKVTRLVDEADV
VMNWLRVNGANSAAVGEDEAEAFEAADEESKLKIECFSADWAIEDLIYALDKAVEEGAVP
FDAYIKQVRVLAREQFSYRAMLLTRSTQNDCSSMVAIGQYNT
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggctccaccagcatcttcaatccaattcattgatactgcgctttcttgtaccagtcct
catgcattatcctacccagaccctaaacaaaaatggctcatcagaaaacaccttctttcg
ctaatccaggaatatccaagtttcaccccttccaccgatacattcacccacaacaacggc
accgccgtcaaccttctaaacgtcaccggagaactccgcgtcaccaggtatacccctcac
gtacctctcactatttggctccatgaaaagtacccttacatgcctcctttagtctttgtt
ttggcaaattcgatgaccccaattcatcgagaccacccttttgttgacctatctggttcc
acctcttctccttatctccaaacttggatattccctcgatgcaacctcatcgaccttgtt
cgtaaccttgtcaggattttcagtcgcgaccatcctttcatttatggctctgctgtcgca
agcttcactcacccttcccttgtctcaaagatggaggctcttgaccgtctttcggggatg
cttcactatgatatgacggcctttctggtaaaaaatgaagaagaattggaggacttgtct
aagttgcaggaggaactgatcaagagagagactataactagaaacatgatcagtagtctt
gagcaggagaagtccagccttaaggacaaagtgacgaggctggtggatgaagctgatgtg
gtaatgaactggttgagagttaatggtgcgaactcggctgctgttggagaagatgaagcg
gaggcgtttgaagctgcagatgaagaatcaaaactgaagattgaatgctttagcgcagat
tgggccatagaggatttgatatatgcattggacaaggcagttgaggaaggagcagtgcct
tttgatgcatatattaagcaagtgagagtgctggcgagagagcagttctcatatagagct
atgctcctgacacgttcaacccaaaacgactgctcatcaatggtggctattggccaatac
aacacttga
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