Manihot esculenta (cassava): 110616093
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Entry
110616093 CDS
T05761
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc00040
Pentose and glucuronate interconversions
mesc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110616093
Enzymes [BR:
mesc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
110616093
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Paralog
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
110616093
NCBI-ProteinID:
XP_021614106
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Position
5:complement(31062730..31064495)
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AA seq
352 aa
AA seq
DB search
MMNPIDSCWRQNPNWRRSRQQLATCSVGFSGKMTNNIGKDTIRYKVSDPRDDPLNPKKGT
LRYGATMITGKVWITFQKNMNIQLVKPLLISSFTTLDGRGVDIHITGNACLLVYKATDVI
IHGLRIHHCKAVGPSSVRGPNGEMVPLGQMDGDAIRLVTASKVWIDHNTLYSCQDGLLDV
TRGSTDVTISNNWFKDQDKVMLLGHDDGYLRDKNMRVTVVFNHFGPNCNQRMPRVRHGYA
HVANNLYQGWEQYAIGGSMNPSIKSEANYFIAPKSGNKEVTWRNGINENSKPWKFYSVGD
VFENGASFIQTGLRGAKPNYNDQQRFKVADAKFVRSITKSSGALKCFRTIMC
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatcccattgatagttgctggagacagaaccctaattggcgtagaagcaggcag
caactggccacttgctccgtggggttttcagggaagatgactaacaatattgggaaagat
actatccgctacaaagtgagtgatcctagagatgatccattgaaccctaagaaagggact
ctgcggtacggagccaccatgatcacggggaaagtgtggataactttccaaaagaacatg
aatattcagcttgtcaagccccttctcattagcagtttcaccacactcgacggccgtggt
gtcgacattcacatcactggcaacgcttgccttctggtctacaaggcaacagatgtgatc
atccatgggctaaggattcaccattgcaaggccgtaggtccatcatcggtaaggggacca
aatggagaaatggtgcctctaggtcagatggatggagatgcaatcagattggttactgca
tcaaaggtttggatagaccacaatacactgtattcatgccaggatggtcttctggacgta
actcgaggatctacagacgttacgatctctaacaactggttcaaggaccaagacaaggtt
atgcttcttggacacgacgatggatacttgagagacaagaacatgagagttactgttgtg
ttcaatcactttggtccaaattgcaaccaacgaatgccaagggttcgccatggatatgca
cacgtggccaacaacctgtaccaaggatgggaacagtatgcaattgggggaagcatgaat
cctagcattaagagtgaagccaactacttcattgcaccaaaatcaggaaataaagaggta
acatggagaaatggcatcaatgagaatagcaagccatggaagttctattccgtgggagat
gtatttgaaaatggagcctctttcatccagactggtttaagaggggcaaagcctaattat
aatgatcaacagagatttaaggttgcagatgccaagtttgtgaggtcgataacaaagtca
tcaggtgctttaaagtgttttagaactatcatgtgctga
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