Manihot esculenta (cassava): 110616265
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Entry
110616265 CDS
T05761
Name
(RefSeq) phosphomethylpyrimidine synthase, chloroplastic isoform X1
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc00730
Thiamine metabolism
mesc01100
Metabolic pathways
mesc01240
Biosynthesis of cofactors
Module
mesc_M00897
Thiamine biosynthesis, plants, AIR (+ NAD+) => TMP/thiamine/TPP
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
110616265
Enzymes [BR:
mesc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
110616265
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GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-GeneID:
110616265
NCBI-ProteinID:
XP_021614366
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Position
1:complement(34808267..34812638)
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AA seq
647 aa
AA seq
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MASVQATSLSSAVCKNGSHKFPSGSFLPGFDGVLGRGSLKKEIWPRSLATSVPRATLTFD
PPTTNSDKAKQRKHTVDPSSPDFLPLPSFEQCFPRSTKEYREIVHEESGHVLKVPFRRVH
LSGDEPSFDNYDTSGPQNISPRIGIPKLRKDWVDRREKLGAPRYSQMYYAKQGIITEEML
YCAAREKLDPEFVRSEVARGRAIIPSNKKHLELEPMIVGRNFLVKVNANIGNSAVASSIE
EEVYKVQWATMWGADTVMDLSTGRHIHETREWILRNSAVPVGTVPIYQALEKVNGIAENL
SWEVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKEN
FAYEHWDDILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWEKDVQV
MNEGPGHIPMHKIPENMQKQLEWCNEAPFYTLGPLTTDIAPGYDHITSAIGAANIGALGT
ALLCYVTPKEHLGLPNRDDVKAGVIAYKISAHAADLAKGHPHAQAWDDALSKARFEFRWM
DQFALSLDPMTAMSFHDETLPSEGAKVAHFCSMCGPKFCSMKITEDVRKYAEEHGYGSAE
EAVQHGMDAMSAEFLAAKKTVSGEQHGEVGGEIYLPASYIKSSKRSM
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggcatcggtgcaagctactagtttgtcctctgctgtgtgcaaaaatggaagccataag
tttccaagcggctccttcttgccggggtttgatggtgtgcttgggcgtggatctcttaag
aaggaaatatggcctcgttctttggcgacatctgttcctagggccaccttaacctttgat
cctccaacaacaaattcagataaagctaagcagaggaaacatactgttgatccttcttct
cctgatttccttcctcttccctccttcgaacaatgttttccaagaagcaccaaagaatac
agggaaattgttcatgaagaatccggtcacgtcctcaaagttcctttcagacgggtccac
ttgtctggggatgaacccagttttgataattatgataccagtggtcctcaaaacattagt
ccccgtatcggaattcctaaactgaggaaagactgggttgataggcgtgagaagctaggc
gcaccaagatacagtcagatgtactatgcgaagcaaggaataataacagaggaaatgtta
tattgtgctgctcgtgagaagcttgacccagagtttgtcaggtcagaggttgctcgtgga
cgggcaataatcccttcgaacaagaagcacctggagttggagccaatgattgttggaaga
aattttttggtcaaagtcaatgcaaatattggaaattctgctgtggcaagctctattgag
gaagaagtttataaggttcaatgggcaaccatgtggggtgctgacactgtcatggacctc
tcaactggtcggcacatccatgagacccgtgagtggatcttacgaaactctgctgtaccg
gttggaactgtgcccatctatcaagcacttgaaaaagttaatggaattgctgaaaatctg
agctgggaagtcttcagagacacattgattgaacaagctgagcagggtgtagactatttc
actatccatgctggggttcttctacgatacattcctttaactgctaaacgcatgacagga
attgtttctcgtggaggatcaattcatgcaaagtggtgcttagcttatcacaaggagaat
tttgcatatgaacactgggatgacatacttgacatctgtaatcaatatgatgtggcactt
tcgatcggtgatgggctgagacctgggtccatatatgatgccaatgacactgctcagttt
gcagagctcttgactcaaggggaactaacccgtagagcatgggagaaggatgtacaggtg
atgaatgaaggacctggccatattcctatgcacaaaatcccagagaacatgcaaaaacag
ctcgaatggtgcaatgaagcacctttctacactcttggacccctgacaactgatattgct
cctggatatgatcacattacctctgccattggtgctgccaacattggggctcttggcact
gcacttctctgttatgtcacaccaaaggagcatcttgggttgccaaatagggatgatgtg
aaggcaggtgttatagcatataagatatctgcacatgcagctgatttagcaaaaggtcac
cctcatgctcaagcctgggatgatgcattaagcaaggcccgatttgagttcagatggatg
gaccaatttgctttatccttggaccccatgactgcaatgtccttccatgatgaaaccctg
ccatcagaaggtgcaaaagtagcacatttttgctccatgtgtgggccgaagttctgctct
atgaagataacagaggatgtgcgaaagtatgcggaagagcatggttatggtagtgcagag
gaagctgtgcagcacgggatggatgccatgagtgctgagttcctggctgctaagaaaact
gttagtggagaacaacatggtgaagttggtggggaaatctacctgccagcaagttatatt
aaatcctctaagaggagcatgtga
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