KEGG   Manihot esculenta (cassava): 110616562
Entry
110616562         CDS       T05761                                 
Name
(RefSeq) autophagy-related protein 16
  KO
K17890  autophagy-related protein 16-1
Organism
mesc  Manihot esculenta (cassava)
Pathway
mesc04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:mesc00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    110616562
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mesc04131]
    110616562
   03029 Mitochondrial biogenesis [BR:mesc03029]
    110616562
Membrane trafficking [BR:mesc04131]
 Autophagy
  Autophagosome formation proteins
   Atg12 conjugation proteins
    110616562
 Others
  Specific organelles associated proteins
   Auto phagosome
    110616562
Mitochondrial biogenesis [BR:mesc03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    110616562
SSDB
Motif
Pfam: WD40_Prp19 WD40 EIF3I WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML ATG16 ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st Beta-prop_NWD2_C Beta-prop_SPT8 Beta-prop_HPS5 Beta-prop_VPS8 Beta-prop_WDR19_1st Beta-prop_WDR35_TULP_N WDR54 NBCH_WD40 WD40_RFWD3 Beta-prop_EIPR1 PEP5_VPS11_N Beta-prop_Vps41 Cytochrom_D1 Cep57_CLD_2 PQQ_2 TMPIT
Other DBs
NCBI-GeneID: 110616562
NCBI-ProteinID: XP_021614663
LinkDB
Position
6:24378767..24381949
AA seq 509 aa
MSQEELAREAIKLALKALRKRHLLEEGAHAPACIALSRPIISQGSEWKEKAENLEIELQQ
CYKAQSRLSEQLVVEVAESRASKAALEEKEAACTDLQKELAQTRDVCSQLRAYLEEKIKA
LELVVGENQSLQNQLEQMAVKVKNSEAENKMLVDRWMLQKVQDAERLNEANSLYEEMIDP
LKTSDLEKLAQQQVDGMVRQSEEGAGYFVESTIPTICKHKITAHEGGCASVMFEYNSSKL
ISGGQDQSIKMWDANTGSLSRTLYGCLGSVLDLSVTSDNRSVIAASRSNNLYVWDANSGR
VRHTLTGHIDEVCAVDVGKSSSRHVVSAAYDRRIKVWDLQKGFCTSTIVFHSNCNAVCFS
MDGLTICSGHVDGNLRLWDVHSGKLLSEVAAHSLAITSISLSQNGNVILTSGRDNLHNLF
DMRSLEVWGTLRAAGNRAAYNWSRSCISPDDNYVAAGSADGSVYIWSISKADIVSIQKEH
TSSVLCCSWSGLGKPLATADKKGIIHTWT
NT seq 1530 nt   +upstreamnt  +downstreamnt
atgtctcaggaggagcttgcgagggaagccataaagcttgcgctgaaggcgctaaggaag
cgccatttgcttgaagaaggtgctcatgctcctgcttgtattgctctttccaggcctatt
atctctcagggatcagaatggaaggagaaagcagaaaatctcgaaatcgaacttcagcaa
tgttacaaagctcaatctcgattatccgagcaacttgtggtggaggtggcagagtccaga
gcatcaaaagctgccttagaagaaaaagaagcagcatgtactgatttgcaaaaggagttg
gctcaaacaagggatgtgtgctctcaattaagggcatatttggaagaaaagattaaggct
ttagaattggttgtgggtgagaatcaatctcttcaaaatcaattggaacagatggctgtc
aaggttaagaattcagaagcagaaaataaaatgttagttgatcgctggatgctgcaaaag
gtgcaggatgctgaacgtcttaatgaggcaaattcactgtatgaagaaatgattgatccg
ctcaagacaagtgatttagagaaacttgcacagcagcaagtggatgggatggtccggcaa
agtgaagagggtgctgggtattttgtggaatcaaccattcccactatatgcaagcacaaa
attactgctcatgagggcggctgtgcttctgtgatgtttgagtataactcaagcaaactg
atcagtggtggacaggatcaatcaatcaaaatgtgggatgcaaacactggatctttaagt
cgtactctttatggttgccttgggtctgttcttgatctttctgtgaccagtgataataga
tctgtcattgcagccagtcgctcaaacaacttgtatgtatgggatgccaattcagggcgt
gtccgtcacactctcactggccacattgacgaagtgtgtgctgtagatgtcggcaaaagt
tcaagtcgacatgttgtcagtgctgcttatgatcgtagaataaaagtgtgggatttgcaa
aagggcttctgcaccagcactattgttttccacagcaattgcaatgctgtgtgtttcagt
atggatggactgaccatttgttcagggcacgttgatggaaatcttcgtttatgggatgtt
cattcaggaaagctactcagtgaagttgctgcacattcacttgccattacatctataagt
ctatctcaaaatgggaatgtcatattgacgagtgggagagataacttgcacaacttattt
gatatgaggtctttggaagtttggggaacgttaagagctgctggaaacagagcggcatat
aattggagtcggtcttgtataagtcctgatgacaactatgttgctgctggatcagctgat
ggatctgtctatatttggtcaatatctaaagctgatatcgtaagcattcagaaggaacac
acttcttctgtcctttgttgttcgtggagtggacttggaaaaccattagctactgctgac
aagaagggaattatacatacctggacatga

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