Manihot esculenta (cassava): 110616578
Help
Entry
110616578 CDS
T05761
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc00040
Pentose and glucuronate interconversions
mesc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110616578
Enzymes [BR:
mesc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
110616578
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
110616578
NCBI-ProteinID:
XP_021614688
LinkDB
All DBs
Position
6:complement(24412387..24414346)
Genome browser
AA seq
424 aa
AA seq
DB search
MYFLNSQAFPSFVNFHLSHYASSPMGLLLFLFSVLAISSLVSSSPVQDPELVVNQVHRAI
NGSRRNLGYLSCGTGNPIDDCWRCDPNWEKNRQRLADCAIGFGKKAIGGRDGKIYVVTDS
SDDDAVNPKPGTLRHAVIQDDPLWIIFARDMTIKLKEELIMNSFKTIDGRGASVHIAGGP
CITIQFVTNIIIHGLHIHDCKPGGNAYVRDSPRHYGWRTVSDGDGVSIFGGSHIWVDHNS
LSNCNDGLVDAIHGSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLV
QRMPRCRHGYFHVVNNDYTHWEMYAIGGSAAPTINSQGNRFVAPDIRFSKEVTKHEDAPE
SEWKNWNWRSEGDLLVNGAFFTASGAGASSSYAKASSLSARPSSLVGSITVGSGALNCKK
GVRC
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgtacttcctaaactctcaagcttttccctcctttgttaatttccatctttcacactac
gcctcatcaccaatgggtctccttctctttctcttctctgtcctcgccatctcttccctc
gtttcctcttccccagttcaggacccagagcttgtcgtaaaccaagtacatagggccatc
aacggctccaggaggaacttgggttatctctcttgtggaactgggaaccccatcgacgat
tgctggagatgcgaccccaattgggagaagaaccgccagcgcttggcggattgtgccatt
gggttcggtaagaaagccattggcggaagagatggaaaaatttacgtggtgacagattcc
agtgatgatgacgctgtgaatcctaagccagggactttgaggcatgcagtgattcaagat
gatccattgtggatcatttttgctcgtgacatgactattaaattaaaggaagagctgatc
atgaactctttcaagaccatcgatggtagaggtgctagcgtccacattgcaggtggtccg
tgcattactatacaatttgtgaccaacattattattcatggactacacatacacgactgt
aagccaggagggaatgcttatgtgagggactccccacggcactacgggtggaggactgta
tcagacggtgatggagtgtccatctttggtggcagccacatttgggtggaccataactca
ttgtcaaattgtaacgatggactggttgatgcaattcatgggtccacagcaatcacaatt
tcaaacaattacatgacccaccatgataaagtaatgttactaggtcacagcgattcctac
actcaagacaagaacatgcaggtcactatagccttcaatcactttggagaagggcttgtc
caaaggatgccaagatgcagacatgggtatttccatgtggtcaacaatgactacacccat
tgggaaatgtatgccattggaggcagtgcagcaccaaccatcaacagccaaggcaacaga
tttgttgcacctgatattagattcagcaaagaggtcacaaagcatgaggatgcaccagaa
agtgaatggaagaactggaattggaggtctgagggagacctgctggtgaatggtgcattt
ttcacagcttcaggtgcaggagcctcttcaagctacgctaaggcatcaagcttgagtgct
agaccttcttcacttgtgggttccataactgtgggatcaggtgcccttaattgcaagaaa
ggggttcgttgctga
DBGET
integrated database retrieval system
