Manihot esculenta (cassava): 110616579
Help
Entry
110616579 CDS
T05761
Name
(RefSeq) E3 ubiquitin-protein ligase BIG BROTHER
KO
K19045
E3 ubiquitin-protein ligase BIG BROTHER and related proteins [EC:
2.3.2.27
]
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mesc04121
]
110616579
Enzymes [BR:
mesc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110616579
Ubiquitin system [BR:
mesc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110616579
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-RING_5
Prok-RING_4
zf-RING_16
Cu-oxidase_3
zf-RING_UBOX
zf_RING_Vps8
VPS18_RING_C
zf-C3H2C3
zf-TRM13_CCCH
Motif
Other DBs
NCBI-GeneID:
110616579
NCBI-ProteinID:
XP_021614690
LinkDB
All DBs
Position
6:complement(29209541..29215380)
Genome browser
AA seq
248 aa
AA seq
DB search
MSWNPHMEAHYMNTSYPYNSAGSFMEYFEGLTYEHVNFIFDGASQIQESVYPSMNANLYK
FSLSQSGSSLYYDHSHAYEIHAHGPQIDDYRRPLENSSTMTNVPTAAVSAEREGNENMGA
QNDPEECLRRHQSAQDLQVIWQDNVDPDNMSYEELLELGDVVGTQSRGLSQESIALLPVS
KYKCSFFLRRKSRSERCVICQMEYKRGDRRIMLPCKHAYHVGCGTRWLSINKACPICYVD
VFGDSSKH
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgagttggaatccacatatggaagctcattacatgaacactagctacccttataattct
gccggaagctttatggaatattttgaaggccttacatatgaacatgtgaatttcattttt
gatggggcttcccaaattcaggaaagtgtgtacccatccatgaatgcaaatctctacaag
ttcagcttgtcccaatctgggagtagtttatattatgaccatagtcatgcttatgagatc
catgctcacgggccacaaattgatgattatagaaggcctctggagaattcttcaactatg
actaatgtgccaactgctgctgtaagtgcagaacgggaaggaaatgaaaacatgggtgct
caaaatgatcctgaggaatgtctgcggagacatcagagtgctcaagatcttcaggtcatt
tggcaggacaacgttgatcctgacaatatgagttatgaggaattactggagttaggtgat
gtagttggaactcaaagtcgtggtctttcccaagaaagtattgctttgcttcctgtctca
aaatacaagtgcagcttcttcctaagaaggaaatcaaggagtgagaggtgtgtgatttgc
caaatggaatataagcgcggcgacaggcggatcatgctgccatgcaaacatgcctatcac
gttggttgtgggactagatggcttagcatcaataaggcttgccctatttgttacgtggat
gtgtttggcgattcatcaaaacattag
DBGET
integrated database retrieval system
