Manihot esculenta (cassava): 110616589
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Entry
110616589 CDS
T05761
Name
(RefSeq) autophagy-related protein 11
KO
K08330
autophagy-related protein 11
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
110616589
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mesc04131
]
110616589
03029 Mitochondrial biogenesis [BR:
mesc03029
]
110616589
Membrane trafficking [BR:
mesc04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Scaffold protein
110616589
Mitophagy
Scaffold proteins
110616589
Mitochondrial biogenesis [BR:
mesc03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
110616589
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG17_like
ATG11
FliD_C
DUF4667
Motif
Other DBs
NCBI-GeneID:
110616589
NCBI-ProteinID:
XP_021614706
LinkDB
All DBs
Position
6:8341883..8350418
Genome browser
AA seq
1157 aa
AA seq
DB search
MSSSITGGSVHEGKLLVHLAENGHSFELDCDETTPVEGVMRYIESVAGINFNEQLVLCLD
MKLESQRPLSAYKLPSSDRDVFIFNRARLQINSPPPPPEQVDVLEVADPPSPACPHDPHP
LDDALDPALKALPSYERQFRYHYHRGHAIYSRTHMKYEHCERLLREQKVQERAVEVARGN
LEQYYRMISQNYSEFMKRYTPQHRMHSELLMNYRRDLENLRSIKLHPGLQTTTRKCLVDF
VKEDNLRKAVENCSNSHRQFEKKVLEFKQMFSEVKSKVEELFACRTLIPFRNLELTIKEH
QRFINEQKSIMQSLSKDVNTVKKLVDDCLSCQLSSSLRPHDAVSALGPMYDVHDKNHLPK
MEACDRSITKLLEFCKDKKNEMNNFVHNYMQKITYVSYIIKDAKFQFPVFREAMMRQDDL
FTELKLVRGIGPAYRACLAEVVRRKASMKLYMGMAGQLAERLATKRETEVRRREEFRKAH
TSYIPRDILDSMGLYDVPSQCDVNIAPFDTNLLNIDISDLDRYAPEYLVGLPVKSEKHAS
LKGSFSMSNDSSQSAEVEEIVADALDKDYSEELLEGSELVEIAGTSKLEVENTKLKAELA
SAKALICSLSLEVEYESVDDDKVESLLKNAAEKTVEALQLKDEHEKHLQSMLKAKQLQCL
SYEKRIQELEQRLSDQFLQGQKLSSSNIASDFDLPAAKAFDSKPQILSDVQALVPCISTS
EPMDEVSCISSSLDAKLGLFTRQPSKGREGGDENMMDSSGMLNTQLDSLMMEPHREELQV
SDKDGKDRNLGQLGMSLANSSTAESMPEAVNVIPTDAAIEPKIAGDLILELESALGEKSN
QLSETESKLKAAMEDVALLTRELETSRKLLDESQMNCADLENCLHEAREAAQTHLCAADR
RASEYSALRASAVKMRGLFERLRSCICGPGGVAGFADSLRALAQSLGNSINDNEDDGNAE
FQKCIRVLADRVGFLSRHREELLDKYPKLEAANEQLRKELEEKKELVTTLYKKHQLEKQA
NKERISFGRLEVHEIAAFVLNSAGHYEAINRNCSNYYLSSESVALFTDHLPSRPSYIVGQ
IVHIERQIVKPLPSSSPRPEHGKTDPVDHLTCDTGTDQLTLNLGSTSNPFSLPIGCEYFV
VTVAMLPDTTIRSAPPS
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atgagttcaagcatcacgggaggttcggttcatgagggtaagcttctagttcacctagca
gaaaatggccactcctttgagcttgattgtgatgaaacaacccctgtggaaggggttatg
aggtatattgaatctgtcgctgggattaattttaatgaacagcttgttttgtgtttggat
atgaaacttgaatctcagcggccactttctgcttataagcttccatccagtgatcgagat
gtgtttatattcaatagagctaggctccaaatcaattcgcctccccctccacctgagcaa
gttgatgttcttgaagttgcagatcctccatcaccagcatgtccgcatgatccccaccct
ttagatgacgcattggatcctgctttgaaggctttgccttcttatgagagacaatttagg
taccattatcatagaggtcatgcgatatacagtagaactcatatgaagtacgagcattgt
gagaggttattgagggagcagaaggtgcaggagagagcggttgaggttgctaggggtaat
ttggaacaatattataggatgattagtcagaattactcagaattcatgaagcgctacaca
ccgcagcataggatgcattccgaactcttaatgaattacaggagggatttagaaaatctg
aggtctattaaacttcatccaggtttgcaaaccactacacgcaagtgtttagtggatttt
gtgaaggaagataacctgagaaaagctgttgagaattgtagcaactcccataggcagttt
gagaagaaggttttggagtttaagcagatgtttagtgaagtaaagagcaaggtagaggag
ttatttgcttgcaggactttgattccttttaggaatttagagctaaccatcaaagagcat
cagcgattcatcaatgaacagaagagtataatgcaatctttaagcaaagatgtaaataca
gtgaagaaacttgtggatgattgtctgtcctgccaattgtcctcttcacttcgccctcat
gatgcagtttcagccctgggtcccatgtatgatgtccatgacaagaatcatttgcctaag
atggaggcttgtgaccgttcaattaccaagcttcttgagttctgcaaggataagaagaac
gagatgaacaactttgtgcacaattacatgcaaaaaataacatatgtttcttatataatt
aaagatgctaagtttcagtttccagtttttagagaagcaatgatgcgtcaggatgattta
tttactgaactgaagcttgttcgtgggattggtcctgcatatagagcctgccttgcagaa
gttgtgagaagaaaggcctccatgaaactttacatgggcatggctggacagttggctgaa
aggcttgctaccaaaagggagactgaagttaggagacgggaagagtttcggaaagcacat
acttcatatattccaagggacatattagattcaatgggcttgtatgatgttccaagccag
tgcgatgtcaatatagctccttttgacacaaatttgcttaatattgatatctcagacctg
gaccgttatgcacccgaatatttggtgggactacctgtaaagagtgagaagcatgcaagc
ttgaaaggctcattttccatgtccaatgacagttctcaatctgctgaggttgaagagatt
gttgcagacgctcttgacaaagactattctgaggagcttcttgaaggcagtgagttggta
gagattgctggaactagcaagttggaagttgagaacacgaaacttaaagctgaactagct
tctgcaaaagcactcatatgttccctcagccttgaagttgaatatgagtcggtggatgat
gataaggtggaaagcttgttgaagaatgctgcagagaagacagttgaagctctgcagctg
aaagatgagcatgagaagcatctccaatctatgcttaaggcaaaacaactgcaatgtttg
tcatatgagaagcgtatccaagaattagagcagagattgtctgatcagtttctgcaaggg
caaaaactttcaagcagcaatattgcatctgattttgaccttccagctgcaaaagctttt
gacagcaaaccacaaatccttagtgatgtgcaagcccttgtgccttgtatatcaacttca
gaacccatggatgaggtttcttgtatttctagttctttggatgcaaaactagggcttttc
acaaggcaaccaagcaaaggtcgagaagggggtgatgaaaatatgatggattcctctgga
atgttaaatactcagttggattctctaatgatggaaccgcatcgtgaagaactgcaagtc
agtgataaagatgggaaagatagaaatttgggacaactgggcatgtcattggcaaacagt
tccacagctgagagtatgcctgaagcggtaaatgtgatacctactgatgcagcaatagag
ccaaagatcgctggtgatctcattttggaattggaaagtgcacttggagaaaaatcaaat
caattgagtgaaactgaatccaagctcaaagctgctatggaggatgttgcattgcttact
agggaattggaaacaagtaggaagctccttgatgaatctcagatgaattgtgctgacttg
gagaactgtttgcatgaagcgagagaagcagcccaaacccatctttgcgctgctgatcgg
agggcctcagagtatagtgctctgcgtgcatctgctgtgaaaatgcgtggcctttttgaa
agacttaggagctgtatatgtggcccgggtggagttgctggttttgctgattccttgcgt
gccttagctcaatctttgggcaactccattaatgacaatgaagatgatggtaatgctgag
tttcagaagtgcatccgggttcttgcagatagagttggtttcttgtctaggcatcgtgaa
gagctgcttgacaagtacccaaaactggaagctgcaaatgagcagcttagaaaggagttg
gaagaaaagaaggaacttgttaccactttatataaaaagcatcaacttgagaagcaggca
aacaaggaaaggatatctttcgggcgattggaagttcatgagatagctgcatttgttctc
aactcagctgggcattatgaggcaatcaaccgaaattgttctaactactatctatcttct
gaatctgtggccttgtttactgatcatcttccgagtcgtcccagctacattgttgggcag
attgtgcatattgaacgccagattgtgaagccattgccttcaagctcacccaggcctgag
catggcaagacagatccagtggatcatctgacttgtgacacaggaactgaccaattgacc
ctgaatttgggatcaacttcaaacccattcagtcttcctattggctgtgaatacttcgta
gtgacagtagctatgttacctgataccaccattcgttcagcacctccttcctga
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integrated database retrieval system
