KEGG   Manihot esculenta (cassava): 110616605
Entry
110616605         CDS       T05761                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 6A
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
mesc  Manihot esculenta (cassava)
Pathway
mesc03020  RNA polymerase
mesc03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mesc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    110616605
  09124 Replication and repair
   03420 Nucleotide excision repair
    110616605
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mesc03021]
    110616605
   03400 DNA repair and recombination proteins [BR:mesc03400]
    110616605
Transcription machinery [BR:mesc03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     110616605
  RNA polymerase III system
   RNA polymerase III
     110616605
  RNA polymerase I system
   RNA polymerase I
     110616605
DNA repair and recombination proteins [BR:mesc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      110616605
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 110616605
NCBI-ProteinID: XP_021614723
LinkDB
Position
6:complement(27145905..27148422)
AA seq 143 aa
MADDDYNEMDMGYEDEPPEPEVEEGAEEDVDNNNNEDVQGEPIETEDKEDQEPVERPRKT
SKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG
SYEDWGVDELIVEDSWKRQVGGD
NT seq 432 nt   +upstreamnt  +downstreamnt
atggcggatgacgactacaatgaaatggatatgggatatgaggatgagccgccagagcct
gaggttgaagaaggagccgaggaggacgttgataacaataacaatgaggatgttcaaggg
gaacccattgaaactgaggataaagaagatcaagaacctgtggaacgtcctcgcaaaaca
tcaaagtatatgacaaaatatgagcgtgctagaattttgggaactcgtgctttgcagatc
agcatgaatgcacctgtaatggttgagttggagggtgaaactgacccactcgagattgct
atgaaggaactaagagagcgaaaaatacctttcaccatccggcgctacctccctgatgga
agttatgaggactggggagtagatgaactgattgtggaagactcgtggaagaggcaagtt
ggaggtgattga

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