Manihot esculenta (cassava): 110616613
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Entry
110616613 CDS
T05761
Name
(RefSeq) two-component response regulator ARR12 isoform X1
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
110616613
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mesc03000
]
110616613
Transcription factors [BR:
mesc03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
110616613
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
110616613
NCBI-ProteinID:
XP_021614731
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All DBs
Position
6:11644936..11650411
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AA seq
699 aa
AA seq
DB search
MTVEDKRSGLVNDDCFPVGMRILAVDDDPICLKVLENLLRKCQYHVTTTNQAIAALKMLR
ENKNKYDLVISDVNMPDMDGFKLLELVGLEMDLPVIMLSAHSDKELVYKGVTHGAVDYLL
KPVRIEELKNIWQHVIRRKKTQPGDQNRSPNQGKPLDEAQEGGQGLASSGSVDQNGKVNR
KRKDQDEDEEEEGEENLNENEDPGTQKKPRVVWSVELHRKFVAAVNHLGLDKAVPKKILD
LMNVEGLTRENVASHLQKYRLYLKRISSVASQQANMVAAFGAKDSSYLRMGSLDGFGDFR
TSNGPGRPSSTSISSYTTGGMFGRLNSPAGLTLRGIASSGLLQSGHSQSPSNSVITLGKF
QPAVLPASPGANLFQGVQSSVEPNQLKVKSNAHIGQFTRNDDTSGFTLATNFVDARVTIG
GLSNTVSNSTSNPLMLQVNPQLSQYRGAFATQSSLSVPTLNHESFDVRLHGSSNFLDHSR
CTENWQGAVQLSKFPTNSLPLSEPFSHDSLSRSNLRDNLPSTSSQIGNSLNDFDSSSVHA
TPLYSRVDMQGQTGSISNVVQNMNYNSRQRWEEYSRDYNPNLNNSFSTINSLVSGNGVVG
LLSQSMDQRNKFDASLPGQINNVTPSTFLHAEVDNSALDPKMRSNEDYLLEQTKSQNGFA
QNNYDPLDDIMDAMIKQQEQQNEAMLMDGEFGFDDAYSL
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgactgttgaggataaacgaagtggtttagtcaatgatgattgttttccagttggtatg
cgtattctagctgttgatgacgacccaatttgccttaaagttttagagaatctgcttcga
aaatgccagtatcacgttacaactaccaatcaagcaatagcagctctgaaaatgcttaga
gaaaacaaaaacaagtatgatctcgttataagtgatgtgaatatgcctgacatggatggc
tttaagctgcttgagcttgtggggcttgaaatggacctacctgtcatcatgttatccgca
catagcgataaggagcttgtttataaaggggttacacatggtgctgttgactacttgtta
aagcctgtgagaattgaggaactcaagaacatatggcaacatgtgatcaggaggaaaaaa
acacaacccggggaccaaaacaggtcccccaatcaaggtaaacctctggatgaagcacaa
gaaggtggacaaggattggcatcaagtggcagtgtagatcagaatggaaaagtgaatcgg
aaaaggaaggaccaagatgaagatgaggaagaagagggtgaggagaatttaaatgagaat
gaggacccaggaactcagaagaagccccgggttgtttggtcagtggagcttcacaggaag
tttgttgcagctgttaatcatttgggtcttgacaaggctgttccaaagaaaattcttgac
cttatgaatgttgaaggacttacaagggaaaatgtggcaagccacctgcagaaatatagg
ctttatctgaaaagaatcagtagtgtagcatctcagcaagccaatatggttgctgcattt
ggggcaaaagattcctcttatttgcgcatgggttctctggatggatttggagattttcgc
acttcgaatggaccagggaggccgtcgagcacatctatatcatcatatacaacagggggt
atgtttggcagattgaactcccctgctggtttaaccttgcgaggtatagcttcttctggt
cttctccagtcgggccattctcaatctccgagtaattctgttattacacttggaaagttt
cagccagctgttttgcctgctagcccaggtgcaaatttgtttcaaggtgttcaatcatca
gtggagcccaaccagctcaaggtaaaatccaatgcccacattggacagtttactcgcaac
gatgatacctcaggcttcacacttgcaactaacttcgtagatgccagagttactattggt
ggcttgagtaacactgtgtccaattccacaagtaaccctctgatgctacaagtaaacccc
caactaagtcagtataggggagcatttgcaactcaatcttctctaagtgtgcctacactg
aatcacgagtcttttgatgttcgtctccatggttcttcaaactttctggatcatagtaga
tgcaccgaaaactggcagggggcagttcaattatccaaatttccaacaaattctttacca
ttgagtgaaccattcagtcatgattcattgtccaggagtaatttgagagacaatctacca
tccaccagctctcagattggtaacagcctgaatgattttgattcctccagtgtgcatgcc
acacctttatattctcgagtagacatgcaagggcaaacaggctcgattagtaatgttgtt
caaaacatgaattacaattcaaggcagagatgggaagaatatagccgggattataacccc
aacctaaataattcattcagtaccataaactctttggtttctggcaatggtgttgtgggt
ttgttgagccaaagtatggaccagagaaataagttcgatgcgtctttgcctggccagata
aacaatgtcacaccatccactttcttgcatgcagaggttgataactctgctctggaccca
aaaatgaggtccaatgaagattatcttttggagcaaacaaagtctcagaatggttttgct
caaaacaactatgaccctttggatgatataatggatgcgatgataaaacagcaggagcag
caaaatgaagcaatgctaatggatggagagtttggatttgatgatgcatactcactgtga
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