Manihot esculenta (cassava): 110616769
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Entry
110616769 CDS
T05761
Name
(RefSeq) nuclear matrix constituent protein 1 isoform X1
KO
K27866
protein CROWDED NUCLEI
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mesc03036
]
110616769
Chromosome and associated proteins [BR:
mesc03036
]
Eukaryotic type
Centrosome formation proteins
LINC complex
110616769
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RxLR_effector
Motif
Other DBs
NCBI-GeneID:
110616769
NCBI-ProteinID:
XP_021614943
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All DBs
Position
6:21003077..21012924
Genome browser
AA seq
1204 aa
AA seq
DB search
MFTPQRRPSSAITLTPRSEVRKSGVANVASTSLKIGGKGKEVAFMDGSMPPPLPPPVGSL
SGNGAELDTEDMEDWRRFREAGLLDEVVMERKDRQALLEKASRLEKELFDYQYNMGLLLI
EKKEWNLKYEELRQALAEAQEILRREQSANRIAFSEAEKREENLRKALSIEKQCVADIFE
RRRNKEKEFEKALRDLQEERRQIKHASESKLADAKALAVGMEEKSAEVEEKLRVAEAKLA
EINRKNLELDVKLQELEDRESVFQRECLSLNTEREAHEASRCKQREDLLEWERKLQKGEE
RLCELRRTLNHREEKANENEKILEQKERDLEEAEKQIDLSFAKLKEREDDVNNRLSDLTA
KEKKADSTRRIMERQENDLIALEVKLSAREKVEVQQLLDEHQTALDAKMHEVELELEEKR
KELDHELRSTAEVLGQREGEILHREEKLRKREQALDKKLERVKEKEKDLDVKLKSFKDKE
KSMKVEQKKLDFDQQKLLADKQSLQVLKDDCEKIRSEIAQQELQIGEKSENLKITNYERL
EHLRMQAELKQELEKCRRHGEFLLKEGEDLKEERDKFEKEWEVLEGKRAQLSKELNKITE
EKEQFVKFQRNEEERLKKEENATKEYIQRELEAVRLEKESFEVRKRDEQVLLSKNTDMEH
DQMMQDFESQRITFEADLIRRREAMEKVLQERQRLFDEQREREHKDMDYLKEVAQKELKE
IRSEKLKIEKEKQEVAKNKKQLEGQQFGMQKDIDELVVLSNKLRDQREQVIRDRNHFLAF
VGKHKSCKNCVDITSEFILSDLLPPDMEDRMILPLRRQSDEILRNVEDDVDVPVVMNVNR
SPGELDLGYSNSQERMSWFRKCTSKIFSISPTKKVEHCSVPILQEEKTDDFGAFASKAAR
RSRVSGDESGQLDYDGIKGKEDRYSVSVDDHSIMDSKVEDSEQSELKSSRRKPGRRRKAG
ISRTRSVKAVVEDAKLFLEKSSEEPECHAKDVRSNDIYHIVDESIEKPAGNIARKRERAP
TESEQDAGDSEGGSESVTTGARRKRRQVVASAITPGQKRYNLRRHRTTGATSVNQASSGL
TKMRERETDGCESVETTTKPETANALPLGVASKTGKSTDALNVTTVKNVESTGDRAVRVN
QADVAKSIEITELSEEVNVTTEYVDEDENGSTIHEEDEEEYDDDELEHPGEVSIGKKIWT
FFTT
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atgttcacgccacagaggaggccgtcatcggcgatcacattaactcctcgaagcgaggtg
cgcaagagcggtgtcgcaaatgttgcttcgactagccttaagattggagggaaaggtaaa
gaggtagcgtttatggatggatcaatgccgccaccgcttcctccgccggtgggttcgctg
agtggtaatggtgcagagttggataccgaagacatggaggattggaggcggtttagggag
gcgggtctattagatgaagtggtcatggagagaaaagaccgtcaggcgcttcttgagaag
gcctcgaggctcgaaaaggagctttttgattaccaatataatatggggcttctccttatt
gagaagaaagagtggaatttgaaatacgaagaactaaggcaagcattagcagaagctcag
gagatcctcaggcgtgagcagtcagcaaacagaattgcattctctgaagctgagaagagg
gaggaaaatttaagaaaagccttgagcattgagaagcagtgtgtggctgatatatttgaa
agacgaagaaataaagagaaagagtttgaaaaggctttgcgtgacttgcaagaggagcgt
agacagatcaagcatgcttctgagtcaaagttggctgatgcaaaagctttagctgttggg
atggaagaaaaatctgctgaggttgaagaaaagttgcgtgttgctgaagccaagcttgct
gaaatcaacagaaagaatttagagttggatgtgaaattgcaagagttggaagatcgtgaa
agtgtgtttcagagggagtgtctctccttaaatactgagagagaagcacatgaggcatct
cgctgcaagcaaagagaagatttacttgagtgggagaggaaactacagaaaggtgaagag
agattgtgtgagcttcgaagaactctcaaccacagagaggaaaaggctaatgaaaatgag
aagattcttgagcagaaagagagggatttagaggaggctgaaaagcagattgatctatct
tttgcaaagttgaaagagagggaagatgatgtaaacaatcggctctcagatttgactgca
aaagagaagaaagctgactctacgagaagaatcatggagaggcaggagaatgacttaatt
gccttggaagtgaagcttagtgctagagaaaaagtggaagttcagcagctccttgatgag
catcagactgctctggatgctaaaatgcatgaggttgagttagaactagaggagaaaagg
aaagagcttgatcatgaattgagaagtacagcagaggtattggggcaacgtgaaggtgaa
attcttcacagggaagaaaaattgaggaaaagagaacaagctttggataagaagttggag
agagtgaaggagaaagaaaaggaccttgatgtaaaattgaaaagtttcaaggataaagaa
aagtctatgaaggttgagcagaaaaagttggactttgatcagcaaaaattgcttgctgat
aaacagagcctgcaggttctcaaagatgactgtgagaagataaggtctgaaattgctcag
caggaattgcagattggtgaaaagagtgaaaatcttaaaataactaattatgagaggtta
gaacaccttcgtatgcaggcagaactgaaacaggaattggagaagtgcaggcgtcatggg
gagttcctcttgaaagaaggtgaagacttgaaagaggagagagataagtttgagaaggag
tgggaagtgctggaagggaaaagagctcaacttagtaaggagcttaacaaaattaccgaa
gagaaggagcaatttgtgaagttccagcgtaatgaagaggaaagactgaagaaggaagaa
aatgcaacgaaagagtacattcagagggagttggaggctgttagacttgaaaaagaatca
tttgaagtgagaaagagggatgagcaagttcttttatcaaaaaatactgatatggagcat
gatcaaatgatgcaagactttgaatcacagagaataacttttgaggctgatctgataagg
aggagggaggcaatggagaaagtcctgcaagaaaggcagcggttgtttgatgagcagagg
gagagagaacataaggatatggattacttaaaagaagttgctcagaaggaattgaaagaa
atacgctctgaaaagcttaagatagaaaaagaaaagcaagaagttgcaaaaaacaagaag
cagctggagggacagcaatttggaatgcaaaaagacattgatgagcttgtggtgctcagc
aataagcttcgggaccaacgtgagcaggttatcagggacagaaatcacttccttgcattt
gttgggaagcataagagctgcaagaactgtgtagacattactagtgagtttatactttct
gatctcttgccccctgacatggaagacaggatgatccttccccttcggaggcaatctgat
gaaattttgaggaatgtcgaagatgatgtggatgttcccgttgttatgaatgtcaaccga
tctcctggtgaactagatttggggtattccaattctcaagaacgcatgtcttggttccgt
aaatgcacctcgaagatttttagcatatcccctactaaaaaggtagagcattgttcagta
ccaattttgcaagaagagaagactgatgattttggtgcatttgccagtaaagcagccaga
cgtagccgtgtttctggggatgaatctgggcagcttgattatgatggcatcaaaggaaag
gaagatagatattctgtgtctgttgatgatcacagcattatggacagtaaggtagaggat
tctgaacaatcagagctgaagagtagtcgacgtaaacctgggaggagacgcaaggctggt
ataagtagaacacgttcagttaaagcagttgttgaagatgcaaagctatttcttgagaaa
agctcagaagaacctgaatgtcatgcaaaagatgtgcggtctaatgatatttatcatatt
gttgatgaaagtatagagaagccagctggcaacattgcaaggaagcgggaacgagcacca
actgaaagtgagcaggatgctggtgatagtgaaggaggttctgagagtgtcacaacaggt
gctcgcaggaagaggcgacaagttgtggcttcagcaattactccagggcaaaagcgctac
aatcttaggcgacacaggactacaggagcaacctctgtcaaccaagcatcgtctggcttg
accaagatgagggagagagaaactgatggctgtgaatctgttgaaacaacaacgaaacct
gaaactgcaaatgcattgccacttggagttgctagtaagactggcaagtctacagatgca
ctgaatgtcacaacagtaaaaaatgttgagtccacaggggatagggcagtcagggtcaac
caggctgatgtagcaaaatctattgagattacggagttgagtgaggaagtaaatgttaca
acagaatatgtggatgaagatgagaatggcagcacaattcatgaggaggacgaagaggaa
tatgatgatgatgagttggagcaccctggtgaagtttccataggaaaaaagatctggacc
ttttttactacatga
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integrated database retrieval system
