KEGG   Manihot esculenta (cassava): 110616884
Entry
110616884         CDS       T05761                                 
Name
(RefSeq) U6 snRNA phosphodiesterase
  KO
K23093  U6 snRNA phosphodiesterase [EC:3.1.4.-]
Organism
mesc  Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:mesc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mesc03041]
    110616884
Spliceosome [BR:mesc03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    110616884
SSDB
Motif
Pfam: HVSL DUF5461
Other DBs
NCBI-GeneID: 110616884
NCBI-ProteinID: XP_021615087
LinkDB
Position
6:complement(25967623..25969414)
AA seq 289 aa
MEALLASYGDASSDSDSDTALSTKAVTESASIPNTRPDVVVLPPPPVSLLTPPNSTGLID
YLQAGQPNRARSFPHVEGNYALHVYIPVYIPPTSKKEVVLFLKRVSSVVPCLHVVDADVP
LDILCKDDHKLEKVAVGREFHISLGRTVPIRVHQIDSVIAMLRQRLQFQKRYWIDFNKWE
VFINDDKTRTFLSMEVVTGGLAEIARQIEYVNEVYKLHNLPEFYKDPRPHISLAWALGDI
NDSLKRAVEEETDRCIGASVQKRIFTCKFSGIECKIGNKTYRICKFHDE
NT seq 870 nt   +upstreamnt  +downstreamnt
atggaagctctattagcctcatatggagacgcatcatcggactcggactctgacactgct
ctttccacaaaagcagtcaccgaatctgcttcaattccaaatacgcgaccggatgtcgta
gttttgccacctcctcctgtatcacttctcacccctcctaattctaccggtctcatagat
tacttgcaagctggccagccaaatcgagcgaggagctttccccatgttgagggcaactat
gctttgcacgtttacatcccagtttatataccgcctacctcaaagaaagaagtggtcctc
tttttgaagagggtatcatctgttgtgccctgtcttcatgttgtggatgctgacgttcca
cttgacatcttatgcaaagatgatcacaagcttgaaaaagttgcagtaggtagagaattc
cacattagcttgggaagaactgtccccattcgagttcatcagattgattctgtgattgca
atgcttcgccagaggcttcagtttcagaaacgatattggattgattttaataagtgggag
gtttttatcaatgatgataaaactcgaactttcctttcaatggaagttgttacgggagga
ttagctgagattgcaaggcaaattgaatatgttaatgaggtctacaaactccacaatctt
cctgaattttacaaggatccacgccctcatatatccttggcttgggcattgggggacatc
aatgattcattaaagagagcagttgaagaagaaacagataggtgcattggggcttctgta
cagaaacgtatttttacctgtaaattcagtggcattgagtgtaagattggtaataaaaca
tacagaatttgtaaatttcatgatgaataa

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