Manihot esculenta (cassava): 110616943
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Entry
110616943 CDS
T05761
Name
(RefSeq) plant UBX domain-containing protein 10
KO
K18726
FAS-associated factor 2
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mesc03019
]
110616943
Messenger RNA biogenesis [BR:
mesc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
110616943
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Gene cluster
GFIT
Motif
Pfam:
UBX
FAF1
Motif
Other DBs
NCBI-GeneID:
110616943
NCBI-ProteinID:
XP_021615169
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Position
6:complement(23980609..23982433)
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AA seq
384 aa
AA seq
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MSSPRIREASFNGIVRRMVSLPRSIVGGFSRAMGHSIGRVGIGSGRRDHNLPLDLQLQPP
CEPPIAPEEWTFQSTFEQQYGFRHPFFYACHFMDALKIAEDEHKFVFLYLHSPHHPFTPS
FCRETLCSELVVQYLDANFVCWGALADRGEGLQMAATLRPASFPCCAVVAPAAGNSLAVL
QQMEGPISPAELVEILQRTVEEQGSAFGIPRANQEEKIRARSKEEEKIRADRQLREEQDA
AYLAALKIDKEKENAKNLPQDQKARKPIQTLRQNETQKQYKGKGRAASTVRETLLKETAT
QSKDPQVTKILIRFPNGERREQSFFSSDKVQSIYKYIDSLGLPGVINYRLISTFPRRVYG
FDQIGMTLKDAGLHPKATLFLELL
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcccccagaatcagggaggcttctttcaatgggattgtacgccggatggtgagt
ctgcctcggagtattgtaggaggattttcaagagcaatgggtcatagtataggtcgcgtt
ggaataggatcagggagaagagatcataatctaccattagaccttcaactgcaacctcca
tgtgagcccccaattgcaccagaagagtggacatttcaatctacttttgagcagcaatat
ggtttcaggcatccttttttctatgcttgccatttcatggatgcgttaaagatagcagag
gatgagcacaagtttgtgttcttgtatctccattcgcctcaccaccccttcactccctct
ttctgtagggagactctatgttcagaattagtggtgcagtatcttgatgcaaactttgtt
tgctggggagcacttgcagacagaggagaaggtttgcagatggctgcaaccttgcgacct
gcaagctttccgtgctgtgcagttgtggctccggctgctggtaatagcttagcagtgctg
caacagatggaagggccaatttccccagcagagttggtggagattctgcagagaacagta
gaggaacaaggatcagcctttggaattccaagagcaaaccaagaggagaagattagagca
aggtccaaggaagaagagaaaataagagcagatcgtcaacttagagaagaacaagacgca
gcgtatcttgcagctctgaaaatagacaaggagaaggaaaatgccaagaacttgcctcaa
gatcaaaaggctcggaaaccaattcagactcttaggcagaacgaaacacagaagcaatac
aaaggtaaaggtagagcagcttccactgttagagaaactctattaaaagaaactgctact
cagtctaaggatcctcaagtaacaaagattttgatacggtttccaaatggtgaaagaaga
gaacagagtttcttcagctcagataaggtccagtcaatctacaagtacattgattcttta
gggttaccaggcgttatcaactatagattgatatcaaccttccccagaagagtctatggt
tttgatcagataggaatgacactcaaagatgctggactccaccctaaagcaacccttttc
ttggagcttctgtaa
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